RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 KMT2CQ8NEZ4 4911 aaKnown RBP13.55□□□□□ -0.24
PNKP-230ENST00000638016 TRAV3A0A0B4J244 114 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 CGB1A6NKQ9 187 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 TMEM127O75204 238 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 OR2J3O76001 311 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 AREGP15514 252 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 RPA2P15927 270 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 CBX5P45973 191 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
PNKP-230ENST00000638016 EXOSC2Q13868 293 aaKnown RBP13.54□□□□□ -0.24
PNKP-230ENST00000638016 KLF5Q13887 457 aaPredicted RBP13.54□□□□□ -0.24
PNKP-230ENST00000638016 GIMAP1Q8WWP7 306 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 SPIN2AQ99865 258 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 SPIN2BQ9BPZ2 258 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 S4R3C0 116 aa13.54□□□□□ -0.24
PNKP-230ENST00000638016 TRBV9A0A0B4J1U6 114 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 ZP3P21754 424 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 GNRHRP30968 328 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 RPL27AP46776 148 aaKnown RBP13.53□□□□□ -0.24
PNKP-230ENST00000638016 OR4A47Q6IF82 309 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 TTC9CQ8N5M4 171 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 OR9G4Q8NGQ1 327 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 OR6Q1Q8NGQ2 317 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 ZNF2Q9BSG1 426 aaPredicted RBP13.53□□□□□ -0.24
PNKP-230ENST00000638016 FXYD6Q9H0Q3 95 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 SMAD5-AS1Q9Y6J3 95 aa13.53□□□□□ -0.24
PNKP-230ENST00000638016 BMPR1BO00238 502 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 CREBL2O60519 120 aaPredicted RBP13.52□□□□□ -0.25
PNKP-230ENST00000638016 HPGDSO60760 199 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 S1PR2O95136 353 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 IGHV3-23P01764 117 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 REG1AP05451 166 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 EDN2P20800 178 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 HERV-K104P61576 105 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 MSMO1Q15800 293 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 SNX29P2Q8IUI4 249 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 USMG5Q96IX5 58 aa13.52□□□□□ -0.25
PNKP-230ENST00000638016 PPP5D1E7EU14 171 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 IGLV1-51P01701 117 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 HLA-AP01891 365 aaKnown RBP13.51□□□□□ -0.25
PNKP-230ENST00000638016 RLN1P04808 185 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 ZNF735P0CB33 412 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 NAT1P18440 290 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 ELK1P19419 428 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 HLA-DMAP28067 261 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 KIR2DS2P43631 304 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 ATP5G2Q06055 141 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 RPEL1Q2QD12 228 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 RNASE12Q5GAN4 147 aaKnown RBP13.51□□□□□ -0.25
PNKP-230ENST00000638016 LYSMD2Q8IV50 215 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 ZBTB34Q8NCN2 500 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 OR5H2Q8NGV7 314 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 VSTM2AQ8TAG5 236 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 MOB3AQ96BX8 217 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 ELOVL1Q9BW60 279 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 HRASLSQ9HDD0 168 aa13.51□□□□□ -0.25
PNKP-230ENST00000638016 STAB2Q8WWQ8 2551 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 FAM223BA6NKX1 122 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 NDUFB8O95169 186 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 HRASP01112 189 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 CSN3P07498 182 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 HLA-GP17693 338 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 PRSS3P35030 304 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 HRH1P35367 487 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 RPL8P62917 257 aaKnown RBP13.5□□□□□ -0.25
PNKP-230ENST00000638016 CATR1Q13166 79 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 CTF1Q16619 201 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 C15orf32Q32M92 178 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 DHRS11Q6UWP2 260 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 ANKRD13BQ86YJ7 626 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 SBSPONQ8IVN8 264 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 FAM223AQ8IWN6 122 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 GPX8Q8TED1 209 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 KCTD12Q96CX2 325 aaKnown RBP13.5□□□□□ -0.25
PNKP-230ENST00000638016 FANCD2OSQ96PS1 177 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 SLC2A9Q9NRM0 540 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 BET1LQ9NYM9 111 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 DMRT1Q9Y5R6 373 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 U3KQK5 164 aa13.5□□□□□ -0.25
PNKP-230ENST00000638016 IZUMO1RA6ND01 250 aa13.49□□□□□ -0.25
PNKP-230ENST00000638016 RBFOX2O43251 390 aaKnown RBP eCLIP13.49□□□□□ -0.25
PNKP-230ENST00000638016 FRMD6-AS1P0C7T7 363 aa13.49□□□□□ -0.25
PNKP-230ENST00000638016 ADAMTSL5Q6ZMM2 481 aa13.49□□□□□ -0.25
PNKP-230ENST00000638016 TMEM140Q9NV12 185 aa13.49□□□□□ -0.25
PNKP-230ENST00000638016 FBXL7Q9UJT9 491 aa13.49□□□□□ -0.25
PNKP-230ENST00000638016 ZNF257Q9Y2Q1 563 aa13.49□□□□□ -0.25
PNKP-230ENST00000638016 SELENOKQ9Y6D0 94 aa13.49□□□□□ -0.25
PNKP-230ENST00000638016 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.48□□□□□ -0.25
PNKP-230ENST00000638016 DPPA5A6NC42 116 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 NPIPB5A8MRT5 1133 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 UPK2O00526 184 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 PGLYRP1O75594 196 aaPredicted RBP13.48□□□□□ -0.25
PNKP-230ENST00000638016 GABARAPO95166 117 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 HPRT1P00492 218 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 APOA1P02647 267 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 PSMB6P28072 239 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 OR2B8PP59922 312 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 GPR107Q5VW38 600 aa13.48□□□□□ -0.25
PNKP-230ENST00000638016 Q8N1Y9 231 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms