RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 MDKP21741 143 aaPredicted RBP17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 SRPXP78539 464 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 TMEM187Q14656 261 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 PRSS8Q16651 343 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 MRGPRG-AS1Q2M3A8 158 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 TRIM16LQ309B1 348 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 FOXRED2Q8IWF2 684 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 MMD2Q8IY49 270 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 DUSP18Q8NEJ0 188 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 IL22RA2Q969J5 263 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 SEC22AQ96IW7 307 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 TMEM56Q96MV1 263 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 OR51J1Q9H342 316 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 TMEM140Q9NV12 185 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 NUDT15Q9NV35 164 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 NUBP2Q9Y5Y2 271 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 TMEM56-RWDD3S4R434 201 aa17.69■□□□□ 0.42
CHRNA7-231ENST00000637786 AP4M1O00189 453 aa17.68■□□□□ 0.42
CHRNA7-231ENST00000637786 CA2P00918 260 aa17.68■□□□□ 0.42
CHRNA7-231ENST00000637786 KRASP01116 189 aa17.68■□□□□ 0.42
CHRNA7-231ENST00000637786 MECP2P51608 486 aaKnown RBP17.68■□□□□ 0.42
CHRNA7-231ENST00000637786 CX3CL1P78423 397 aa17.68■□□□□ 0.42
CHRNA7-231ENST00000637786 SSX9Q7RTT3 188 aa17.68■□□□□ 0.42
CHRNA7-231ENST00000637786 ZNF430Q9H8G1 570 aaPredicted RBP17.68■□□□□ 0.42
CHRNA7-231ENST00000637786 RNF114Q9Y508 228 aa17.68■□□□□ 0.42
CHRNA7-231ENST00000637786 IGF1P05019 195 aa17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 MAS1LP35410 378 aa17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 G6PCP35575 357 aa17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 PJVKQ0ZLH3 352 aa17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 PPP1R1AQ13522 171 aa17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 DCTN2Q13561 401 aaKnown RBP17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 NRARPQ7Z6K4 114 aa17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 RBPMSQ93062 196 aaKnown RBP17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 CLCC1Q96S66 551 aa17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 WNT10AQ9GZT5 417 aa17.67■□□□□ 0.42
CHRNA7-231ENST00000637786 LINC01548A6NM66 108 aa17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 UPK2O00526 184 aa17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 SFT2D2O95562 160 aa17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 VAMP1P23763 118 aa17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 CRIP2P52943 208 aaPredicted RBP17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 PROK1P58294 105 aa17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 SSBP2P81877 361 aaPredicted RBP17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 TMEM95Q3KNT9 176 aa17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 AWAT1Q58HT5 328 aa17.66■□□□□ 0.42
CHRNA7-231ENST00000637786 TRAV6A0A075B6T7 132 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 ACTL6BO94805 426 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 H2AFB2P0C5Z0 115 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 OR4E1P0C645 316 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 ANXA7P20073 488 aaKnown RBP17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 RPL8P62917 257 aaKnown RBP17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 NDPQ00604 133 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 FXYD3Q14802 87 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 H2BFWTQ7Z2G1 175 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 ZNF695Q8IW36 515 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 FAM219AQ8IW50 185 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 SELENOHQ8IZQ5 122 aaKnown RBP17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 LGI3Q8N145 548 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 LRTM2Q8N967 370 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 LHFPL5Q8TAF8 219 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 ARPC1AQ92747 370 aa17.65■□□□□ 0.42
CHRNA7-231ENST00000637786 C9orf170A2RU37 121 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 ATP6V0E1O15342 81 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 CNIH1O95406 144 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 IGKV1-5P01602 117 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 HLA-AP01891 365 aaKnown RBP17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 P0C879 139 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 AKR1C2P52895 323 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 TMEM268Q5VZI3 342 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 PLET1Q6UQ28 207 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 LYG2Q86SG7 212 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 STPG2Q8N412 459 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 CHPT1Q8WUD6 406 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 GON7Q9BXV9 100 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 PARP11Q9NR21 331 aa17.64■□□□□ 0.41
CHRNA7-231ENST00000637786 A0A0B4J2A0 478 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 DUXBA0A1W2PPF3 345 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 PTTG1O95997 202 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 HLA-GP17693 338 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 GNB1P62873 340 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 DHRS2Q13268 280 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 TNXAQ16473 311 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 C4orf46Q504U0 113 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 SGMS2Q8NHU3 365 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 WIPF2Q8TF74 440 aaPredicted RBP17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 RRNAD1Q96FB5 475 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 SHPKQ9UHJ6 478 aa17.63■□□□□ 0.41
CHRNA7-231ENST00000637786 SNAPC5O75971 98 aa17.62■□□□□ 0.41
CHRNA7-231ENST00000637786 DUS4LO95620 317 aaKnown RBP17.62■□□□□ 0.41
CHRNA7-231ENST00000637786 KLHDC1Q8N7A1 406 aa17.62■□□□□ 0.41
CHRNA7-231ENST00000637786 SRSF12Q8WXF0 261 aaKnown RBP17.62■□□□□ 0.41
CHRNA7-231ENST00000637786 LSM10Q969L4 123 aaKnown RBP17.62■□□□□ 0.41
CHRNA7-231ENST00000637786 FKBP11Q9NYL4 201 aa17.62■□□□□ 0.41
CHRNA7-231ENST00000637786 PRNDQ9UKY0 176 aa17.62■□□□□ 0.41
CHRNA7-231ENST00000637786 TRAV3A0A0B4J244 114 aa17.61■□□□□ 0.41
CHRNA7-231ENST00000637786 OR9G9P0C7N8 305 aa17.61■□□□□ 0.41
CHRNA7-231ENST00000637786 EGR2P11161 476 aaPredicted RBP17.61■□□□□ 0.41
CHRNA7-231ENST00000637786 VDAC1P21796 283 aa17.61■□□□□ 0.41
CHRNA7-231ENST00000637786 RAB25P57735 213 aa17.61■□□□□ 0.41
CHRNA7-231ENST00000637786 TMEM267Q0VDI3 215 aaPredicted RBP17.61■□□□□ 0.41
CHRNA7-231ENST00000637786 ANKRD55Q3KP44 614 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms