RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 TP53RKQ96S44 253 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 MARVELD1Q9BSK0 173 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 FAM103A1Q9BTL3 118 aaKnown RBP13.54□□□□□ -0.24
CLN6-218ENST00000637223 PLEKHA2Q9HB19 425 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 COMMD9Q9P000 198 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 FBXO7Q9Y3I1 522 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 C3orf85A0A1B0GTC6 90 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 PSMB11A5LHX3 300 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 H0Y980 276 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 OR2A4O95047 310 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 CNIH1O95406 144 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 CD28P10747 220 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 BTCP35070 178 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 SSBP2P81877 361 aaPredicted RBP13.53□□□□□ -0.24
CLN6-218ENST00000637223 FXYD3Q14802 87 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 SP6Q3SY56 376 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 OR4A47Q6IF82 309 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 SHISA2Q6UWI4 295 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 PUSL1Q8N0Z8 303 aaKnown RBP13.53□□□□□ -0.24
CLN6-218ENST00000637223 DMBX1Q8NFW5 382 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 OR5AU1Q8NGC0 362 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 GRPEL2Q8TAA5 225 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 ARPC1AQ92747 370 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 R3HDM4Q96D70 268 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 OR2A7Q96R45 310 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 CITED1Q99966 193 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 ZNF430Q9H8G1 570 aaPredicted RBP13.53□□□□□ -0.24
CLN6-218ENST00000637223 NUBP2Q9Y5Y2 271 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 WSB1Q9Y6I7 421 aa13.53□□□□□ -0.24
CLN6-218ENST00000637223 TEX13DA0A0J9YY54 714 aaPredicted RBP13.52□□□□□ -0.25
CLN6-218ENST00000637223 G3V318 75 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 KBTBD11O94819 623 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 KRASP01116 189 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 IGF1P05019 195 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 SERPINE2P07093 398 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 VDAC1P21796 283 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 ERVK-16P61578 105 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 DEFA6Q01524 100 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 TNXAQ16473 311 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 ECSCRQ19T08 205 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 TMED4Q7Z7H5 227 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 VSTM2AQ8TAG5 236 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 TMEM230Q96A57 120 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 AIFM2Q9BRQ8 373 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 NAA60Q9H7X0 242 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 TMEM140Q9NV12 185 aa13.52□□□□□ -0.25
CLN6-218ENST00000637223 CRYM-AS1A6NIL9 109 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 MARCH11A6NNE9 402 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 FBXO24O75426 580 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 IGKV1-39P01597 117 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 IGKV1D-39P04432 117 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 EGR2P11161 476 aaPredicted RBP13.51□□□□□ -0.25
CLN6-218ENST00000637223 AKR1C4P17516 323 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 G6PCP35575 357 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 SLC35B1P78383 322 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 POU2AF1Q16633 256 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 MMD2Q8IY49 270 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 TMEM167AQ8TBQ9 72 aa13.51□□□□□ -0.25
CLN6-218ENST00000637223 SLC25A21Q9BQT8 299 aaPredicted RBP13.51□□□□□ -0.25
CLN6-218ENST00000637223 FAM212BQ9NTI7 297 aaPredicted RBP13.51□□□□□ -0.25
CLN6-218ENST00000637223 TRAV3A0A0B4J244 114 aa13.5□□□□□ -0.25
CLN6-218ENST00000637223 TRAV41A0A0B4J266 112 aa13.5□□□□□ -0.25
CLN6-218ENST00000637223 CREBL2O60519 120 aaPredicted RBP13.5□□□□□ -0.25
CLN6-218ENST00000637223 TCRBP04435 133 aa13.5□□□□□ -0.25
CLN6-218ENST00000637223 OR5AC1P0C628 307 aa13.5□□□□□ -0.25
CLN6-218ENST00000637223 RBMS2Q15434 407 aaKnown RBP13.5□□□□□ -0.25
CLN6-218ENST00000637223 C10orf55Q5SWW7 151 aa13.5□□□□□ -0.25
CLN6-218ENST00000637223 OR4X2Q8NGF9 303 aa13.5□□□□□ -0.25
CLN6-218ENST00000637223 BET1LQ9NYM9 111 aa13.5□□□□□ -0.25
CLN6-218ENST00000637223 ZNF580Q9UK33 172 aa13.5□□□□□ -0.25
CLN6-218ENST00000637223 UPK2O00526 184 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 ACTL6BO94805 426 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 NDUFB6O95139 128 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 MYOD1P15172 320 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 UCP1P25874 307 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 MECP2P51608 486 aaKnown RBP13.49□□□□□ -0.25
CLN6-218ENST00000637223 CFHR3Q02985 330 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 TCTEX1D4Q5JR98 221 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 UNQ5815/PRO19632Q6UWF5 114 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 SGPP2Q8IWX5 399 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 LFNGQ8NES3 379 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 OR4A5Q8NH83 315 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 CITED2Q99967 270 aaPredicted RBP13.49□□□□□ -0.25
CLN6-218ENST00000637223 GON7Q9BXV9 100 aa13.49□□□□□ -0.25
CLN6-218ENST00000637223 PRAF2O60831 178 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 B3GALNT1O75752 331 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 DHFRP00374 187 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 OPN1MWP04001 364 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 APELAP0DMC3 54 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 OPN1MW2P0DN77 364 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 OPN1MW3P0DN78 364 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 SPNP16150 400 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 HLA-GP17693 338 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 CRIP2P52943 208 aaPredicted RBP13.48□□□□□ -0.25
CLN6-218ENST00000637223 RPL8P62917 257 aaKnown RBP13.48□□□□□ -0.25
CLN6-218ENST00000637223 LCNL1Q6ZST4 164 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 CHAC2Q8WUX2 184 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 SRSF12Q8WXF0 261 aaKnown RBP13.48□□□□□ -0.25
CLN6-218ENST00000637223 SEC22AQ96IW7 307 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms