RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 GATA4P43694 442 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 AWAT1Q58HT5 328 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.68□□□□□ -0.22
CLN5-208ENST00000636183 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
CLN5-208ENST00000636183 J3QKU1 62 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 CYB5R1Q9UHQ9 305 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 A0A1W2PR77 199 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 ALX3O95076 343 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 DRAM1Q8N682 238 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 LHX2P50458 406 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 FAM74A3Q4VXF1 159 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 TMEM45BQ96B21 275 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 IGHV2OR16-5A0A0B4J2B6 119 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 HOXA3O43365 443 aaPredicted RBP13.67□□□□□ -0.22
CLN5-208ENST00000636183 CNTFRP26992 372 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 GPR61Q9BZJ8 451 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 CD7P09564 240 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 FAM71F2Q6NXP2 309 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 TMEM219Q86XT9 240 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 CHCHD5Q9BSY4 110 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 PAM16Q9Y3D7 125 aa13.67□□□□□ -0.22
CLN5-208ENST00000636183 IGHV1-2P23083 117 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 ST6GAL2Q96JF0 529 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 CDC42EP3Q9UKI2 254 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 TRAV24A0A0B4J272 114 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 MYOD1P15172 320 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 REC114Q7Z4M0 266 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 RTN4RL2Q86UN3 420 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 RTTNQ86VV8 2226 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 ARL14EPLP0DKL9 152 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 MDKP21741 143 aaPredicted RBP13.66□□□□□ -0.22
CLN5-208ENST00000636183 Q5PR19 223 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 SDF2L1Q9HCN8 221 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 SLC25A20O43772 301 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 LHBP01229 141 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 NCMAPQ5T1S8 102 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 RPRMQ9NS64 109 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 C21orf62Q9NYP8 219 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 LRP5O75197 1615 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 TMEM70Q9BUB7 260 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 PRSS53Q2L4Q9 553 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 OR4D5Q8NGN0 318 aa13.66□□□□□ -0.22
CLN5-208ENST00000636183 H0YL77 283 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 SH3BGRL3Q9H299 93 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 TDGF1P3P51864 188 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 COL5A1-AS1Q5SY13 56 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 WDR82Q6UXN9 313 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 C17orf100A8MU93 164 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 C8orf88P0DMB2 117 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 NANOS3P60323 173 aaKnown RBP13.65□□□□□ -0.22
CLN5-208ENST00000636183 ZNF324BQ6AW86 544 aaPredicted RBP13.65□□□□□ -0.22
CLN5-208ENST00000636183 TTC9CQ8N5M4 171 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 CLRN3Q8NCR9 226 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 FAM131CQ96AQ9 280 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 GPR146Q96CH1 333 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 LHFPL6Q9Y693 200 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 H3BQ15 152 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 CELA3BP08861 270 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 PRELID3AQ96N28 172 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 ACP7Q6ZNF0 438 aa13.65□□□□□ -0.22
CLN5-208ENST00000636183 RPS11P62280 158 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLN5-208ENST00000636183 A0A087WX48 190 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 DSCR9P59020 149 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 TCF19Q9Y242 345 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 CRYBB3P26998 211 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 FAM89BQ8N5H3 189 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 SPSB4Q96A44 273 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 CD8AP01732 235 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 HOXA6P31267 233 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 ZNF146Q15072 292 aa13.64□□□□□ -0.23
CLN5-208ENST00000636183 NPIPB4C9JG80 1138 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 FXYD7P58549 80 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 OR5P3Q8WZ94 311 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 MSGN1A6NI15 193 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 EREGO14944 169 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 IGF2P01344 180 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 KLK2P20151 261 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 TMEM183AQ8IXX5 376 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 RNF223E7ERA6 249 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 IGHV3-53P01767 116 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 PRB4P10163 310 aaPredicted RBP13.63□□□□□ -0.23
CLN5-208ENST00000636183 PAPPA-AS1Q5QFB9 102 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 BRD3OSQ6XYD6 125 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 RNASEH2CQ8TDP1 164 aaKnown RBP13.63□□□□□ -0.23
CLN5-208ENST00000636183 CCDC88CQ9P219 2028 aa13.63□□□□□ -0.23
CLN5-208ENST00000636183 CXorf65A6NEN9 183 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 ZP3P21754 424 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 TEX45Q8NA69 505 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 AMELYQ99218 206 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 TMEM160Q9NX00 188 aa13.62□□□□□ -0.23
CLN5-208ENST00000636183 RBMY1BA6NDE4 496 aaKnown RBP13.62□□□□□ -0.23
CLN5-208ENST00000636183 RBMY1EA6NEQ0 496 aaKnown RBP13.62□□□□□ -0.23
CLN5-208ENST00000636183 RBMY1DP0C7P1 496 aaKnown RBP13.62□□□□□ -0.23
CLN5-208ENST00000636183 RBMY1A1P0DJD3 496 aaKnown RBP13.62□□□□□ -0.23
CLN5-208ENST00000636183 RBMY1CP0DJD4 496 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms