RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 RAB7AP51149 207 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 LOXL3P58215 753 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 GUCA2BQ16661 112 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 TMEM42Q69YG0 159 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 STUMQ69YW2 141 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 ZNF774Q6NX45 483 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 KIR2DL5AQ8N109 375 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 LRTM2Q8N967 370 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 UBAC2Q8NBM4 344 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 KIR2DL5BQ8NHK3 375 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 RTN4IP1Q8WWV3 396 aaPredicted RBP9.66□□□□□ -0.86
LINC00538-201ENST00000626109 RETNQ9HD89 108 aa9.66□□□□□ -0.86
LINC00538-201ENST00000626109 RCC2Q9P258 522 aaKnown RBP9.66□□□□□ -0.86
LINC00538-201ENST00000626109 LSM5Q9Y4Y9 91 aaKnown RBP9.66□□□□□ -0.86
LINC00538-201ENST00000626109 DIDO1Q9BTC0 2240 aaKnown RBP9.66□□□□□ -0.86
LINC00538-201ENST00000626109 PCNX1Q96RV3 2341 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 IGKV1D-8A0A087WSZ0 117 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 ANGPTL7O43827 346 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 NPSP0C0P6 89 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 ADCYAP1P18509 176 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 DVL1P1P54792 670 aaPredicted RBP9.65□□□□□ -0.86
LINC00538-201ENST00000626109 SRPXP78539 464 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 PSG4Q00888 419 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 RPEL1Q2QD12 228 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 KRTAP27-1Q3LI81 207 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 LEMD1Q68G75 181 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 WFDC8Q8IUA0 241 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 TOMM40LQ969M1 308 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 NRIP2Q9BQI9 281 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 VPREB3Q9UKI3 123 aa9.65□□□□□ -0.86
LINC00538-201ENST00000626109 TGIF2-C20orf24A0A0A6YYL0 155 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 ZNF816-ZNF321PA0A0X1KG74 233 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 A0A1W2PRD5 423 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 GPR137BO60478 399 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 DUSP1P28562 367 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 RAB5CP51148 216 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 RAB2AP61019 212 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 HERV-K104P61576 105 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 TMEM187Q14656 261 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 TMEM268Q5VZI3 342 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 LIAT1Q6ZQX7 453 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 APRG1Q8IVJ8 170 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 OR10V1Q8NGI7 309 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 LINC01560Q8TB33 94 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 MRPL24Q96A35 216 aaKnown RBP9.64□□□□□ -0.87
LINC00538-201ENST00000626109 SULT4A1Q9BR01 284 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 HDHD3Q9BSH5 251 aaPredicted RBP9.64□□□□□ -0.87
LINC00538-201ENST00000626109 ST3GAL6Q9Y274 331 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 UFC1Q9Y3C8 167 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 PDCD6O75340 191 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 TMEM50AO95807 157 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 IGKV3-15P01624 115 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 SEC11BP0C7V7 166 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 APLNRP35414 380 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 P2RY1P47900 373 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 ZNF83P51522 516 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 SRSF3P84103 164 aaKnown RBP9.64□□□□□ -0.87
LINC00538-201ENST00000626109 GNMTQ14749 295 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 PEA15Q15121 130 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 OR5AU1Q8NGC0 362 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 ESRP2Q9H6T0 727 aaKnown RBP9.64□□□□□ -0.87
LINC00538-201ENST00000626109 BIN3Q9NQY0 253 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 TCF19Q9Y242 345 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 TMED3Q9Y3Q3 217 aa9.64□□□□□ -0.87
LINC00538-201ENST00000626109 A0A1W2PRF3 423 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 A0A1W2PRM7 423 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 SMIM9A6NGZ8 99 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 C19orf84I3L1E1 186 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 M0R1B8 84 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 GEMIN2O14893 280 aaKnown RBP9.63□□□□□ -0.87
LINC00538-201ENST00000626109 TSPAN15O95858 294 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 OR5AC1P0C628 307 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 SFTA3P0C7M3 94 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 MUC1P15941 1255 aaPredicted RBP9.63□□□□□ -0.87
LINC00538-201ENST00000626109 ZNF14P17017 642 aaPredicted RBP9.63□□□□□ -0.87
LINC00538-201ENST00000626109 LPAR6P43657 344 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 C22orf34Q6ZV56 151 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 OR10AD1Q8NGE0 317 aa9.63□□□□□ -0.87
LINC00538-201ENST00000626109 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 IGLV1-44P01699 117 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 MBPP02686 304 aaPredicted RBP9.62□□□□□ -0.87
LINC00538-201ENST00000626109 PAX6P26367 422 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 CD200P41217 278 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 FXYD4P59646 89 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 OR2B8PP59922 312 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 TBC1D28Q2M2D7 210 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 Q6ZRG5 221 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 FBXL14Q8N1E6 418 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 C18orf12Q96KH6 178 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 ZNF442Q9H7R0 627 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 PIGBOS1A0A0B4J2F0 54 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 IGHV1-18A0A0C4DH31 117 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 VENTXO95231 258 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 TYMSP04818 313 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 CECR9P0C854 216 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 RCC1P18754 421 aaPredicted RBP9.62□□□□□ -0.87
LINC00538-201ENST00000626109 RBM11P57052 281 aaKnown RBP9.62□□□□□ -0.87
LINC00538-201ENST00000626109 SNRPEP62304 92 aaKnown RBP9.62□□□□□ -0.87
LINC00538-201ENST00000626109 PAX2Q02962 417 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms