RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 GADD45GO95257 159 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 IFNA14P01570 189 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 IFNA6P05013 189 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 CSN2P05814 226 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 LYNP07948 512 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 SRMP19623 302 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 CCL1P22362 96 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 GABRR1P24046 479 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 NFYBP25208 207 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 FASP25445 335 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 BLVRBP30043 206 aaPredicted RBP2.13□□□□□ -2.07
CDKL5-208ENST00000624953 RRM2P31350 389 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 CEACAM3P40198 252 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 ID1P41134 155 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 MAGOHP61326 146 aaKnown RBP2.13□□□□□ -2.07
CDKL5-208ENST00000624953 PITPNAQ00169 270 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 KLF5Q13887 457 aaPredicted RBP2.13□□□□□ -2.07
CDKL5-208ENST00000624953 COQ5Q5HYK3 327 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 CLVS2Q5SYC1 327 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF684Q5T5D7 378 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 OR52W1Q6IF63 320 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF600Q6ZNG1 722 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 SLC25A26Q70HW3 274 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 SSX6Q7RTT6 188 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 TMEM179BQ7Z7N9 219 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 SGPP2Q8IWX5 399 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 FAM58AQ8N1B3 248 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 FTMTQ8N4E7 242 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF439Q8NDP4 499 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 BPIFCQ8NFQ6 507 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 RFESDQ8TAC1 157 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 UBALD1Q8TB05 177 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 THEM6Q8WUY1 208 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 PCNPQ8WW12 178 aaKnown RBP2.13□□□□□ -2.07
CDKL5-208ENST00000624953 RTN4IP1Q8WWV3 396 aaPredicted RBP2.13□□□□□ -2.07
CDKL5-208ENST00000624953 RPEQ96AT9 228 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 RCN3Q96D15 328 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 NIPSNAP1Q9BPW8 284 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 SIKE1Q9BRV8 207 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 TMED9Q9BVK6 235 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 COMMD4Q9H0A8 199 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 GAL3ST2Q9H3Q3 398 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 HMG20AQ9NP66 347 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 MED4Q9NPJ6 270 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 SAR1AQ9NR31 198 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 CMC2Q9NRP2 79 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 DCAF13Q9NV06 445 aaKnown RBP2.13□□□□□ -2.07
CDKL5-208ENST00000624953 ANAPC11Q9NYG5 84 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 CALYQ9NYX4 217 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 SIGLEC8Q9NYZ4 499 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 ABCD2Q9UBJ2 740 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 Q9UF83 564 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 MLXQ9UH92 298 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 NUFIP1Q9UHK0 495 aaKnown RBP2.13□□□□□ -2.07
CDKL5-208ENST00000624953 KIF25Q9UIL4 384 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 DIMT1Q9UNQ2 313 aaKnown RBP2.13□□□□□ -2.07
CDKL5-208ENST00000624953 POLDIP2Q9Y2S7 368 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 RNF213Q63HN8 5207 aa2.13□□□□□ -2.07
CDKL5-208ENST00000624953 TRGV10A0A0A0MS01 117 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 IGHV3-43A0A0B4J1X8 118 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 TRAV41A0A0B4J266 112 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 TMEM269A0A1B0GVZ9 245 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 WRBO00258 174 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 FCN1O00602 326 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 TOR1AO14656 332 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 MPZL2O60487 215 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 NDUFA3O95167 84 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 MOSP00540 346 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 HLA-DRB1P01911 266 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 APOC1P02654 83 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 GAPDHP04406 335 aaKnown RBP2.12□□□□□ -2.07
CDKL5-208ENST00000624953 S100A9P06702 114 aaKnown RBP2.12□□□□□ -2.07
CDKL5-208ENST00000624953 IGHV3-43DP0DP04 118 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF44P15621 663 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 PRKACAP17612 351 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 VDAC1P21796 283 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 CD1BP29016 333 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 HTR1FP30939 366 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 IFNA8P32881 189 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 BMI1P35226 326 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 GLP1RP43220 463 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 RAB7AP51149 207 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF137PP52743 207 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 SSTP61278 116 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 RIPPLY1Q0D2K3 151 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 MADCAM1Q13477 382 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 EXOSC2Q13868 293 aaKnown RBP2.12□□□□□ -2.07
CDKL5-208ENST00000624953 SNCBQ16143 134 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 LTC4SQ16873 150 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 ECSCRQ19T08 205 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 LRRC36Q1X8D7 754 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 RSBN1Q5VWQ0 802 aaPredicted RBP2.12□□□□□ -2.07
CDKL5-208ENST00000624953 RASSF6Q6ZTQ3 369 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 LYG2Q86SG7 212 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 MOB3BQ86TA1 216 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF645Q8N7E2 425 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 OR51T1Q8NGJ9 327 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 OR2T10Q8NGZ9 312 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 FAM81AQ8TBF8 368 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 GNPDA2Q8TDQ7 276 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms