RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 SLC25A46Q96AG3 418 aa19.3■□□□□ 0.68
VEGFA-229ENST00000621747 U3KQK5 164 aa19.3■□□□□ 0.68
VEGFA-229ENST00000621747 DPPA5A6NC42 116 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 IGLV1-51P01701 117 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 TRBV12-3P01733 135 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 PRH1P02810 166 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 ZNF45Q02386 682 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 SSX9Q7RTT3 188 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 TMEM17Q86X19 198 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 NECAP1Q8NC96 275 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 ASCL2Q99929 193 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 EHFQ9NZC4 300 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 ZNF257Q9Y2Q1 563 aa19.29■□□□□ 0.68
VEGFA-229ENST00000621747 HMX3A6NHT5 357 aa19.28■□□□□ 0.68
VEGFA-229ENST00000621747 TRIM64CA6NLI5 447 aa19.28■□□□□ 0.68
VEGFA-229ENST00000621747 TEX22C9J3V5 150 aa19.28■□□□□ 0.68
VEGFA-229ENST00000621747 SULT1C2O00338 296 aa19.28■□□□□ 0.68
VEGFA-229ENST00000621747 RBFOX2O43251 390 aaKnown RBP eCLIP19.28■□□□□ 0.685e-9■□□□□ 10.6
VEGFA-229ENST00000621747 EXOSC2Q13868 293 aaKnown RBP19.28■□□□□ 0.68
VEGFA-229ENST00000621747 HAPLN4Q86UW8 402 aa19.28■□□□□ 0.68
VEGFA-229ENST00000621747 OR4A5Q8NH83 315 aa19.28■□□□□ 0.68
VEGFA-229ENST00000621747 FYTTD1Q96QD9 318 aaKnown RBP19.28■□□□□ 0.68
VEGFA-229ENST00000621747 FUNDC2Q9BWH2 189 aa19.28■□□□□ 0.68
VEGFA-229ENST00000621747 ANAPC10Q9UM13 185 aa19.28■□□□□ 0.68
VEGFA-229ENST00000621747 NPIPB5A8MRT5 1133 aa19.27■□□□□ 0.68
VEGFA-229ENST00000621747 TAS2R46P59540 309 aa19.27■□□□□ 0.68
VEGFA-229ENST00000621747 RPL8P62917 257 aaKnown RBP19.27■□□□□ 0.68
VEGFA-229ENST00000621747 FAM209BQ5JX69 171 aa19.27■□□□□ 0.68
VEGFA-229ENST00000621747 ZNF818PQ6ZRF7 136 aa19.27■□□□□ 0.68
VEGFA-229ENST00000621747 BET1LQ9NYM9 111 aa19.27■□□□□ 0.68
VEGFA-229ENST00000621747 HPRT1P00492 218 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 IL6RP08887 468 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-229ENST00000621747 ZNF735P0CB33 412 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 PRSS3P35030 304 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 TAS2R31P59538 309 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 NCS1P62166 190 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 OR4A47Q6IF82 309 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 OR5H2Q8NGV7 314 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 CD300LFQ8TDQ1 290 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 HRASLSQ9HDD0 168 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 SLC2A9Q9NRM0 540 aa19.26■□□□□ 0.67
VEGFA-229ENST00000621747 OR2J3O76001 311 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 DHFRP00374 187 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 NQO2P16083 231 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 HLA-GP17693 338 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 NAT1P18440 290 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 C15orf32Q32M92 178 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 AADACL3Q5VUY0 350 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 DHRS11Q6UWP2 260 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 OR51H1Q8NH63 302 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 CMTM3Q96MX0 182 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 ZNF2Q9BSG1 426 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-229ENST00000621747 COMMD3Q9UBI1 195 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 PEMTQ9UBM1 199 aa19.25■□□□□ 0.67
VEGFA-229ENST00000621747 TNCP24821 2201 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.24■□□□□ 0.67
VEGFA-229ENST00000621747 SMIM31A0A1B0GVY4 71 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 E7EUB6 86 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 H0Y980 276 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 PMP2P02689 132 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 RFX2P48378 723 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 VBP1P61758 197 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 IL34Q6ZMJ4 242 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 MOB3AQ96BX8 217 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 SIGLEC8Q9NYZ4 499 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 ADAM30Q9UKF2 790 aa19.24■□□□□ 0.67
VEGFA-229ENST00000621747 SORL1Q92673 2214 aa19.23■□□□□ 0.67
VEGFA-229ENST00000621747 BMPR1BO00238 502 aa19.23■□□□□ 0.67
VEGFA-229ENST00000621747 APOA1P02647 267 aa19.23■□□□□ 0.67
VEGFA-229ENST00000621747 EIF4EP06730 217 aaKnown RBP19.23■□□□□ 0.67
VEGFA-229ENST00000621747 GNRHRP30968 328 aa19.23■□□□□ 0.67
VEGFA-229ENST00000621747 POU2AF1Q16633 256 aa19.23■□□□□ 0.67
VEGFA-229ENST00000621747 PLEKHA2Q9HB19 425 aa19.23■□□□□ 0.67
VEGFA-229ENST00000621747 A0A1B0GW64 132 aa19.22■□□□□ 0.67
VEGFA-229ENST00000621747 CRYGCP07315 174 aa19.22■□□□□ 0.67
VEGFA-229ENST00000621747 CSN3P07498 182 aa19.22■□□□□ 0.67
VEGFA-229ENST00000621747 FRMD6-AS1P0C7T7 363 aa19.22■□□□□ 0.67
VEGFA-229ENST00000621747 PSMB6P28072 239 aa19.22■□□□□ 0.67
VEGFA-229ENST00000621747 COMMD9Q9P000 198 aa19.22■□□□□ 0.67
VEGFA-229ENST00000621747 FBXL7Q9UJT9 491 aa19.22■□□□□ 0.67
VEGFA-229ENST00000621747 AREGP15514 252 aa19.21■□□□□ 0.67
VEGFA-229ENST00000621747 SBSPONQ8IVN8 264 aa19.21■□□□□ 0.67
VEGFA-229ENST00000621747 DMBX1Q8NFW5 382 aa19.21■□□□□ 0.67
VEGFA-229ENST00000621747 OR6F1Q8NGZ6 308 aa19.21■□□□□ 0.67
VEGFA-229ENST00000621747 UPK2O00526 184 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 S1PR2O95136 353 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 DEFA4P12838 97 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 HIST1H1BP16401 226 aaKnown RBP19.2■□□□□ 0.66
VEGFA-229ENST00000621747 CTRB1P17538 263 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 CTRB2Q6GPI1 263 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 LCN12Q6JVE5 192 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 C19orf35Q6ZS72 473 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 SGPP2Q8IWX5 399 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 CMTM1Q8IZ96 169 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 Q8N402 240 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 GPX8Q8TED1 209 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 COMMD5Q9GZQ3 224 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 SCPEP1Q9HB40 452 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 TMEM140Q9NV12 185 aa19.2■□□□□ 0.66
VEGFA-229ENST00000621747 RLN1P04808 185 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms