RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 IGKV1D-33P01593 117 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 IGKV1-33P01594 117 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 BCL2P10415 239 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 TFF3Q07654 80 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 FAM71F2Q6NXP2 309 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 LINC00311Q8N616 119 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 ZNF709Q8N972 641 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 RXFP4Q8TDU9 374 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 MAP1LC3BQ9GZQ8 125 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 SLC35D1Q9NTN3 355 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 SLC39A9Q9NUM3 307 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 CTSZQ9UBR2 303 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 CEP295Q9C0D2 2601 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 CTXND1A0A1B0GTU2 59 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 COLCA2A8K830 154 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 DLL1O00548 723 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 DVL1O14640 695 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 MPDU1O75352 247 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 SNRNP70P08621 437 aaKnown RBP12.86□□□□□ -0.35
NR1H3-235ENST00000616973 CCL3L1P16619 93 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 CD1BP29016 333 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 DLK1P80370 383 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 FLI1Q01543 452 aaPredicted RBP12.86□□□□□ -0.35
NR1H3-235ENST00000616973 ETV3LQ6ZN32 361 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 P2RX4Q99571 388 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 GNG13Q9P2W3 67 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 PRNDQ9UKY0 176 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 PLAUP00749 431 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 IFNA1P01562 189 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 LOXP28300 417 aaPredicted RBP12.86□□□□□ -0.35
NR1H3-235ENST00000616973 HOXA1P49639 335 aaPredicted RBP12.86□□□□□ -0.35
NR1H3-235ENST00000616973 DLX6P56179 175 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 RPS16P62249 146 aaKnown RBP12.86□□□□□ -0.35
NR1H3-235ENST00000616973 RAB11AP62491 216 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 ADORA2A-AS1P86434 159 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 FFAR4Q5NUL3 377 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 OR13D1Q8NGV5 346 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 H1FXQ92522 213 aaKnown RBP12.86□□□□□ -0.35
NR1H3-235ENST00000616973 ZNF257Q9Y2Q1 563 aa12.86□□□□□ -0.35
NR1H3-235ENST00000616973 A0A087X0M5 115 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 A0A1B0GX30 115 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 UPK2O00526 184 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 RRHO14718 337 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 FAM122CQ6P4D5 195 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 Q8N7P7 452 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 CYB561D1Q8N8Q1 229 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 OR10G9Q8NGN4 311 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 OR10G7Q8NGN6 311 aa12.85□□□□□ -0.35
NR1H3-235ENST00000616973 MAP1BP46821 2468 aaKnown RBP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 H3BQ15 152 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 SIAH2O43255 324 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 NDUFS6O75380 124 aaKnown RBP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 TMEM155Q4W5P6 130 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 AKIRIN2Q53H80 203 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 OSR1Q8TAX0 266 aaPredicted RBP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 TMEM170AQ8WVE7 144 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 LHX4Q969G2 390 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 ACTR3CQ9C0K3 210 aaPredicted RBP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 BET1LQ9NYM9 111 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 VAX2Q9UIW0 290 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 PUS1Q9Y606 427 aaKnown RBP eCLIP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 PIEZO2Q9H5I5 2752 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 FOLR2P14207 255 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 TAGLN2P37802 199 aaKnown RBP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 FGF8P55075 233 aaPredicted RBP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 ERVFRD-1P60508 538 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 ZNF672Q499Z4 452 aaPredicted RBP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 RBMS3Q6XE24 437 aaKnown RBP12.84□□□□□ -0.35
NR1H3-235ENST00000616973 ABHD12Q8N2K0 398 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 MUC15Q8N387 334 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 TMEM186Q96B77 213 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 C20orf24Q9BUV8 137 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 OR51B2Q9Y5P1 312 aa12.84□□□□□ -0.35
NR1H3-235ENST00000616973 TRBV23-1A0A0A0MS06 115 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 ZFP92A6NM28 416 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 J3QR06 171 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 CYB5BO43169 146 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 TSPAN9O75954 239 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 APOA2P02652 100 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 FBP1P09467 338 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
NR1H3-235ENST00000616973 AKR1C3P42330 323 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 ZNF137PP52743 207 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 ACOT6Q3I5F7 207 aaPredicted RBP12.83□□□□□ -0.36
NR1H3-235ENST00000616973 AVPI1Q5T686 147 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 SLC35E3Q7Z769 313 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 CA5BP1Q8WTZ4 195 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 TMEM204Q9BSN7 226 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.36
NR1H3-235ENST00000616973 ENY2Q9NPA8 101 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 ZNRD1Q9P1U0 126 aa12.83□□□□□ -0.36
NR1H3-235ENST00000616973 KBTBD11O94819 623 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 IGKV1-16P04430 117 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 PPOXP50336 477 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 PRCDQ00LT1 54 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 TMEM177Q53S58 311 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
NR1H3-235ENST00000616973 TREML4Q6UXN2 200 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms