RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 LSM4Q9Y4Z0 139 aaKnown RBP11.84□□□□□ -0.51
TNFRSF11A-205ENST00000616710 PKDREJQ9NTG1 2253 aa11.84□□□□□ -0.51
TNFRSF11A-205ENST00000616710 ETV2O00321 342 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF11A-205ENST00000616710 SCRG1O75711 98 aa11.84□□□□□ -0.51
TNFRSF11A-205ENST00000616710 CLDN15P56746 228 aa11.84□□□□□ -0.51
TNFRSF11A-205ENST00000616710 SLC25A34Q6PIV7 304 aa11.84□□□□□ -0.51
TNFRSF11A-205ENST00000616710 WFDC12Q8WWY7 111 aa11.84□□□□□ -0.51
TNFRSF11A-205ENST00000616710 IGLL1P15814 213 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 PAX1P15863 534 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SCGB2A2Q13296 93 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TNXAQ16473 311 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 C12orf49Q9H741 205 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 PLSCR2Q9NRY7 297 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 OR5B21A6NL26 309 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 GATA2P23769 480 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 KIR2DL1P43626 348 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 IBA57Q5T440 356 aaKnown RBP11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 MRGPRDQ8TDS7 321 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 IGKV1-6A0A0C4DH72 117 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SERTM2A0A1B0GWG4 89 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 H3BUT2 72 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 WDR73Q6P4I2 378 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 NBASA2RRP1 2371 aa11.83□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CIDEAO60543 219 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 HAND1O96004 215 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 OR5AL1P0C617 328 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 NPY1RP25929 384 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TMEM240Q5SV17 173 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 DRAM1Q8N682 238 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SMIM12Q96EX1 92 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SH3BGRL2Q9UJC5 107 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TCFL5Q9UL49 500 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 APC2O95996 2303 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TFF1P04155 84 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SPATA31B1PQ5VZV4 182 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SLC23A3Q6PIS1 610 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 RHBDL1O75783 438 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 IGHV3-48P01763 117 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 FOXL1Q12952 345 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 OR1N2Q8NGR9 330 aa11.82□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SMPD2O60906 423 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 NGFP01138 241 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 OR8B8Q15620 311 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TMEM191AQ9H0A3 160 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 F11RQ9Y624 299 aaKnown RBP11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TRAV9-2A0A087WT02 112 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CCL1P22362 96 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 FGFBP3Q8TAT2 258 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 DNASE2BQ8WZ79 361 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TRAV30A0A087WSZ9 112 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SPINT2O43291 252 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 PLAUP00749 431 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 Q6ZS52 159 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 KCNIP2Q9NS61 270 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 MED13LQ71F56 2210 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 FRYQ5TBA9 3013 aa11.81□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TYMSP04818 313 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 GPR12P47775 334 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 ZNF138P52744 262 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 PSG9Q00887 426 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 AGMATQ9BSE5 352 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TP53TG3Q9ULZ0 132 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 GJE1A6NN92 205 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 RBMXL3Q8N7X1 1067 aaKnown RBP11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TWSG1Q9GZX9 223 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 DECR2Q9NUI1 292 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 RIF1Q5UIP0 2472 aaKnown RBP11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 FOXI3A8MTJ6 420 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 FOXH1O75593 365 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 WNT2P09544 360 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CTSSP25774 331 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SAMD13Q5VXD3 122 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 BPIFA4PQ86YQ2 179 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 BLNKQ8WV28 456 aa11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 AKIRIN1Q9H9L7 192 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF11A-205ENST00000616710 A0A1W2PN81 502 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 C7orf71A4D174 169 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CDIPTO14735 213 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 LEPROTL1O95214 131 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CXorf1O96002 111 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 IGKV1-39P01597 117 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 IGKV1D-39P04432 117 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 HOXA4Q00056 320 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 RSPO1Q2MKA7 263 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TSKUQ8WUA8 353 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 GALMQ96C23 342 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SPACA9Q96E40 222 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 HS3ST3A1Q9Y663 406 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 PCDH15Q96QU1 1955 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 IGHV2-70DA0A0C4DH43 119 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 A0A0J9YW62 118 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 PLXNB1O43157 2135 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 GABRG2P18507 467 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 RHOBP62745 196 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 AESQ08117 197 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 Q6ZPA2 131 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 OR8A1Q8NGG7 326 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms