RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 REG4Q9BYZ8 158 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 DNASE2O00115 360 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 GNG7O60262 68 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 GATA2P23769 480 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 SERF2P84101 59 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 RP1P56715 2156 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 TGOLN2O43493 480 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 FAM53AQ6NSI3 398 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 MUC15Q8N387 334 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 SPSB4Q96A44 273 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 LAMA1P25391 3075 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 ZNF729A6NN14 1252 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 IGFBP2P18065 325 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 GPR6P46095 362 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 ZNF137PP52743 207 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 SUMO1P63165 101 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 ARL16Q0P5N6 197 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 LILRB1Q8NHL6 650 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 HERPUD1Q15011 391 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 LRRC75BQ2VPJ9 315 aa7.47□□□□□ -1.21
PDLIM5-222ENST00000615540 KBTBD11-OT1A0A1B0GTJ5 212 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 B4DEV8 164 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 J3QW42 95 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 LY86O95711 162 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 IL6RP08887 468 aaPredicted RBP7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 LINC00869P0C866 280 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 TMEM42Q69YG0 159 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 ZNF525Q8N782 197 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 HIST1H2BAQ96A08 127 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 PERPQ96FX8 193 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 RPRMQ9NS64 109 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 ASPMQ8IZT6 3477 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 TMSB15BA0A087X1C1 80 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 RND2P52198 227 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 RSPO1Q2MKA7 263 aaPredicted RBP7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 HIGD1AQ9Y241 93 aa7.46□□□□□ -1.21
PDLIM5-222ENST00000615540 HEATR5AQ86XA9 2040 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 IFNL4K9M1U5 179 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 MYOD1P15172 320 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 RPL30P62888 115 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 MEF2BQ02080 365 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 PAX5Q02548 391 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 TBR1Q16650 682 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 MORN2Q502X0 79 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 PRR30Q53SZ7 412 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 Q6P435 159 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 ETV2O00321 342 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 IGHV1-46P01743 117 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 GCSAMLQ5JQS6 135 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 PQLC2Q6ZP29 291 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 CLDND2Q8NHS1 167 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 RRHO14718 337 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 ERVFRD-1P60508 538 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 HSPE1P61604 102 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 LCN2P80188 198 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 LY6DQ14210 128 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 OR5AU1Q8NGC0 362 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 NDFIP1Q9BT67 221 aa7.46□□□□□ -1.22
PDLIM5-222ENST00000615540 A0A0C4DFX4 3053 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 CSN3P07498 182 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 ATP5G3P48201 142 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 ZNF788Q6ZQV5 615 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 PARLQ9H300 379 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 FAM90A26D6RGX4 464 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 MLNRO43193 412 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 HIST1H1BP16401 226 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 APOBEC3AP31941 199 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 RPL27AP46776 148 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 DHRS7BQ6IAN0 325 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 POM121Q96HA1 1249 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 TXN2Q99757 166 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 ZNF586Q9NXT0 402 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 NUP210LQ5VU65 1888 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 A0A0G2JNJ9 132 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 OTX1P32242 354 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 ZNF146Q15072 292 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 LIME1Q9H400 295 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 Q9UFV3 132 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 A0A0G2JRQ6 117 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 CD24P25063 80 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 LGALS7P47929 136 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 KLRB1Q12918 225 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 MBNL2Q5VZF2 373 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 C1orf147Q96MC9 270 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 PLSCR4Q9NRQ2 329 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 TRAV3A0A0B4J244 114 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 CGB1A6NKQ9 187 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 CRYBB3P26998 211 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 CDKN1AP38936 164 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 SCGB2A2Q13296 93 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 P2RX4Q99571 388 aa7.45□□□□□ -1.22
PDLIM5-222ENST00000615540 SNURFLB1AK76 121 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 ICAM4Q14773 271 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 PLA2G2CQ5R387 149 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 NEUROG1Q92886 237 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 NOL4LQ96MY1 436 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 DMRTA2Q96SC8 542 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 ZNRD1Q9P1U0 126 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms