RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 M0QZ24 198 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 KBTBD11O94819 623 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 IGHG4P01861 327 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 OPN1MWP04001 364 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 OPN1MW2P0DN77 364 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 OPN1MW3P0DN78 364 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 FOXE3Q13461 319 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 TNXAQ16473 311 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 POU2AF1Q16633 256 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 AKIRIN2Q53H80 203 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 TRIQKQ629K1 86 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 OR4A47Q6IF82 309 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 MMD2Q8IY49 270 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 GRPEL2Q8TAA5 225 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 TMEM167AQ8TBQ9 72 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 R3HDM4Q96D70 268 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 C5orf66Q9H5L9 145 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 BET1LQ9NYM9 111 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 PTTG2Q9NZH5 202 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 COMMD9Q9P000 198 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 C14orf166Q9Y224 244 aaKnown RBP13.01□□□□□ -0.33
IRF1-211ENST00000613424 TNCP24821 2201 aa13.01□□□□□ -0.33
IRF1-211ENST00000613424 A0A1W2PRX2 142 aa13□□□□□ -0.33
IRF1-211ENST00000613424 MSGN1A6NI15 193 aa13□□□□□ -0.33
IRF1-211ENST00000613424 CREBL2O60519 120 aaPredicted RBP13□□□□□ -0.33
IRF1-211ENST00000613424 ELANEP08246 267 aa13□□□□□ -0.33
IRF1-211ENST00000613424 IL6RP08887 468 aaPredicted RBP13□□□□□ -0.33
IRF1-211ENST00000613424 RPA2P15927 270 aa13□□□□□ -0.33
IRF1-211ENST00000613424 INPP1P49441 399 aa13□□□□□ -0.33
IRF1-211ENST00000613424 C2orf68Q2NKX9 166 aa13□□□□□ -0.33
IRF1-211ENST00000613424 UNQ5815/PRO19632Q6UWF5 114 aa13□□□□□ -0.33
IRF1-211ENST00000613424 LCNL1Q6ZST4 164 aa13□□□□□ -0.33
IRF1-211ENST00000613424 RNF152Q8N8N0 203 aa13□□□□□ -0.33
IRF1-211ENST00000613424 CCDC71LQ8N9Z2 235 aa13□□□□□ -0.33
IRF1-211ENST00000613424 DMBX1Q8NFW5 382 aa13□□□□□ -0.33
IRF1-211ENST00000613424 OR4A5Q8NH83 315 aa13□□□□□ -0.33
IRF1-211ENST00000613424 TRAV3A0A0B4J244 114 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 C3orf85A0A1B0GTC6 90 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 A0A1W2PN81 502 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 MARCH11A6NNE9 402 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 ACTL6BO94805 426 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 KRASP01116 189 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 IGLV1-40P01703 118 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 RPLP1P05386 114 aaKnown RBP12.99□□□□□ -0.33
IRF1-211ENST00000613424 PSMB8P28062 276 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 CHRNA7P36544 502 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 CXorf66Q5JRM2 361 aaPredicted RBP12.99□□□□□ -0.33
IRF1-211ENST00000613424 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 PRR31Q5SQ13 230 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 SRSF12Q8WXF0 261 aaKnown RBP12.99□□□□□ -0.33
IRF1-211ENST00000613424 SCGB3A2Q96PL1 93 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 TP53RKQ96S44 253 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 KLK15Q9H2R5 256 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 ZFP57Q9NU63 452 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 TMEM140Q9NV12 185 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 VSIG4Q9Y279 399 aa12.99□□□□□ -0.33
IRF1-211ENST00000613424 H0Y980 276 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 UPK2O00526 184 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 SOX15O60248 233 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 TSPAN15O95858 294 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 IGKV1-39P01597 117 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 IGKV1D-39P04432 117 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 SERPINE2P07093 398 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 IL7P13232 177 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 MAS1LP35410 378 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 G6PCP35575 357 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 ERVK-16P61578 105 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 RPL8P62917 257 aaKnown RBP12.98□□□□□ -0.33
IRF1-211ENST00000613424 SP6Q3SY56 376 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 ASPHD1Q5U4P2 390 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 S100ZQ8WXG8 99 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 TMEM68Q96MH6 324 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 PHB2Q99623 299 aa12.98□□□□□ -0.33
IRF1-211ENST00000613424 FOXA2Q9Y261 457 aaPredicted RBP12.98□□□□□ -0.33
IRF1-211ENST00000613424 LINC00854A0A1B0GVQ3 168 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 E7EUB6 86 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 APELAP0DMC3 54 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 PF4V1P10720 104 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 HLA-GP17693 338 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 RAB9AP51151 201 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 RPL23AP62750 156 aaKnown RBP12.97□□□□□ -0.33
IRF1-211ENST00000613424 C10orf55Q5SWW7 151 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 TMEM65Q6PI78 240 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 C18orf65Q6ZTR6 163 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 CADM3Q8N126 398 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 ADAD2Q8NCV1 583 aaKnown RBP12.97□□□□□ -0.33
IRF1-211ENST00000613424 OR5T1Q8NG75 326 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 OR5M8Q8NGP6 311 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 SEC22AQ96IW7 307 aa12.97□□□□□ -0.33
IRF1-211ENST00000613424 TEX13DA0A0J9YY54 714 aaPredicted RBP12.96□□□□□ -0.33
IRF1-211ENST00000613424 NAP1L6A6NFF2 107 aa12.96□□□□□ -0.33
IRF1-211ENST00000613424 CRYM-AS1A6NIL9 109 aa12.96□□□□□ -0.33
IRF1-211ENST00000613424 B3GALNT1O75752 331 aa12.96□□□□□ -0.33
IRF1-211ENST00000613424 MYOD1P15172 320 aa12.96□□□□□ -0.33
IRF1-211ENST00000613424 RPL27AP46776 148 aaKnown RBP12.96□□□□□ -0.33
IRF1-211ENST00000613424 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.33
IRF1-211ENST00000613424 FAM110DQ8TAY7 271 aaPredicted RBP12.96□□□□□ -0.33
IRF1-211ENST00000613424 CASTOR1Q8WTX7 329 aa12.96□□□□□ -0.33
IRF1-211ENST00000613424 TMEM230Q96A57 120 aa12.96□□□□□ -0.33
IRF1-211ENST00000613424 SPIN2AQ99865 258 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms