RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SSBP4Q9BWG4 385 aaPredicted RBP10.55□□□□□ -0.72
CTCFL-218ENST00000608440 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
CTCFL-218ENST00000608440 TECRQ9NZ01 308 aaKnown RBP10.55□□□□□ -0.72
CTCFL-218ENST00000608440 TIMM9Q9Y5J7 89 aa10.55□□□□□ -0.72
CTCFL-218ENST00000608440 RALGAPA1Q6GYQ0 2036 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 VSTM5A8MXK1 200 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 NEURL1O76050 574 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 OR7C1O76099 320 aaPredicted RBP10.54□□□□□ -0.72
CTCFL-218ENST00000608440 CEACAM5P06731 702 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 ZNF16P17020 682 aaPredicted RBP10.54□□□□□ -0.72
CTCFL-218ENST00000608440 CCL1P22362 96 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 CD1BP29016 333 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 CX3CL1P78423 397 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 OR5A2Q8NGI9 324 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 MRAP2Q96G30 205 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 C19orf25Q9UFG5 118 aaPredicted RBP10.54□□□□□ -0.72
CTCFL-218ENST00000608440 H0Y980 276 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.54□□□□□ -0.72
CTCFL-218ENST00000608440 HSPB6O14558 160 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 COL8A2P25067 703 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 RPL8P62917 257 aaKnown RBP10.54□□□□□ -0.72
CTCFL-218ENST00000608440 NRN1LQ496H8 165 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 TMEM97Q5BJF2 176 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 NEU4Q8WWR8 484 aaPredicted RBP10.54□□□□□ -0.72
CTCFL-218ENST00000608440 TMEM45BQ96B21 275 aa10.54□□□□□ -0.72
CTCFL-218ENST00000608440 MUC3AQ02505 3323 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 ISLRO14498 428 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 F2RP25116 425 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 GPM6AP51674 278 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 RPL31P62899 125 aaKnown RBP10.53□□□□□ -0.72
CTCFL-218ENST00000608440 FUT7Q11130 342 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 MALLQ13021 153 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 DOLPP1Q86YN1 238 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 SPACA9Q96E40 222 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-218ENST00000608440 NPCDR1Q9BY65 106 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 STRADBQ9C0K7 418 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 SLC17A4Q9Y2C5 497 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 TIMM8BQ9Y5J9 83 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-218ENST00000608440 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 TNRC6AQ8NDV7 1962 aaKnown RBP10.53□□□□□ -0.72
CTCFL-218ENST00000608440 WDR87Q6ZQQ6 2873 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 IGKV1-27A0A075B6S5 117 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 A0A1W2PPV4 95 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 PSMB11A5LHX3 300 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 TLX3O43711 291 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-218ENST00000608440 PDCD6O75340 191 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 AMY1AP04745 511 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 EDDM3BP56851 147 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 TMEM251Q8N6I4 163 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 EAF1Q96JC9 268 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-218ENST00000608440 OR2D2Q9H210 308 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 TNFRSF19Q9NS68 423 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 SERTAD4Q9NUC0 356 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 TBC1D29Q9UFV1 150 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 ZNF835Q9Y2P0 537 aa10.53□□□□□ -0.72
CTCFL-218ENST00000608440 CACNA1DQ01668 2161 aa10.52□□□□□ -0.72
CTCFL-218ENST00000608440 DHRS3O75911 302 aa10.52□□□□□ -0.72
CTCFL-218ENST00000608440 CA1P00915 261 aaPredicted RBP10.52□□□□□ -0.72
CTCFL-218ENST00000608440 CGAP01215 116 aa10.52□□□□□ -0.72
CTCFL-218ENST00000608440 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.72
CTCFL-218ENST00000608440 TRIP6Q15654 476 aaKnown RBP10.52□□□□□ -0.72
CTCFL-218ENST00000608440 TCTEX1D4Q5JR98 221 aa10.52□□□□□ -0.72
CTCFL-218ENST00000608440 VSTM2AQ8TAG5 236 aa10.52□□□□□ -0.72
CTCFL-218ENST00000608440 DIDO1Q9BTC0 2240 aaKnown RBP10.52□□□□□ -0.73
CTCFL-218ENST00000608440 LOC102723996A0A087X1L8 192 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 H3BMH7 237 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 HLA-DQA1P01909 254 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 ARL14EPLP0DKL9 152 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 TCTAP57738 103 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 ATP5G2Q06055 141 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 RNPS1Q15287 305 aaKnown RBP10.52□□□□□ -0.73
CTCFL-218ENST00000608440 SSX8Q7RTT4 187 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 BPIFA4PQ86YQ2 179 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 OSR2Q8N2R0 312 aa10.52□□□□□ -0.73
CTCFL-218ENST00000608440 IGKV1-12A0A0C4DH73 117 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 PRSS38A1L453 326 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 H3BRM9 83 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 IGKV1-39P01597 117 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 IGKV1D-12P01611 117 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 IGKV1D-39P04432 117 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 CLRN1P58418 232 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 SEC11AP67812 179 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 ACP7Q6ZNF0 438 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 SHISA6Q6ZSJ9 500 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 C2orf91Q6ZV80 131 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 SPACA3Q8IXA5 215 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 PP6455Q8WZ26 134 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 TSACCQ96A04 125 aaPredicted RBP10.51□□□□□ -0.73
CTCFL-218ENST00000608440 PRTFDC1Q9NRG1 225 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 DEPPQ9NTK1 212 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 H3BML4 177 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 SYS1-DBNDD2H3BUS1 97 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 FLVCR1-AS1Q8TAF5 88 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 CACNG8Q8WXS5 425 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 BMFQ96LC9 184 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 TIMM29Q9BSF4 260 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 VPS13AQ96RL7 3174 aa10.51□□□□□ -0.73
CTCFL-218ENST00000608440 SDK1Q7Z5N4 2213 aa10.5□□□□□ -0.73
CTCFL-218ENST00000608440 ANKRD30BLA7E2S9 258 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms