RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 TCTEX1D1Q8N7M0 179 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 ST6GALNAC6Q969X2 333 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 ABHD14BQ96IU4 210 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 C19orf24Q9BVV8 132 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 C20orf85Q9H1P6 137 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 CCL28Q9NRJ3 127 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 SLC2A9Q9NRM0 540 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 NUP50Q9UKX7 468 aa8.33□□□□□ -1.08
SMG9-207ENST00000598860 PIGBOS1A0A0B4J2F0 54 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 LY6LH3BQJ8 138 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 M0R1X1 148 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 VENTXO95231 258 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 RLN1P04808 185 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 NHLRC4P0CG21 123 aaPredicted RBP8.32□□□□□ -1.08
SMG9-207ENST00000598860 SAA4P35542 130 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 KIR2DS2P43631 304 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 THBS3P49746 956 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 DLX1P56177 255 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 PIGPP57054 158 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 TRIM16LQ309B1 348 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 UTF1Q5T230 341 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 TPTE2P1Q5T6R2 138 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 ZNF818PQ6ZRF7 136 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 C9orf139Q6ZV77 190 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 KCTD9Q7L273 389 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 TGIF2LXQ8IUE1 241 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 MRGPRFQ96AM1 343 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 MALSU1Q96EH3 234 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 ALX4Q9H161 411 aaPredicted RBP8.32□□□□□ -1.08
SMG9-207ENST00000598860 FAM212BQ9NTI7 297 aaPredicted RBP8.32□□□□□ -1.08
SMG9-207ENST00000598860 NUDT15Q9NV35 164 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 SDHAF2Q9NX18 166 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 RNF150Q9ULK6 438 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 VSIG4Q9Y279 399 aa8.32□□□□□ -1.08
SMG9-207ENST00000598860 ARPC1BO15143 372 aaKnown RBP8.31□□□□□ -1.08
SMG9-207ENST00000598860 PRAF2O60831 178 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 APOA2P02652 100 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 FBP1P09467 338 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 IGHV4-38-2P0DP08 117 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 RRASP10301 218 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 BAMBIQ13145 260 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 OXA1LQ15070 435 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 TMEM128Q5BJH2 165 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 KLF17Q5JT82 389 aaPredicted RBP8.31□□□□□ -1.08
SMG9-207ENST00000598860 TMEM217Q8N7C4 229 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 RTN4IP1Q8WWV3 396 aaPredicted RBP8.31□□□□□ -1.08
SMG9-207ENST00000598860 ZNF251Q9BRH9 671 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 C5orf66Q9H5L9 145 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 HSPB7Q9UBY9 170 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 PRELID3BQ9Y3B1 194 aa8.31□□□□□ -1.08
SMG9-207ENST00000598860 TEX13DA0A0J9YY54 714 aaPredicted RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 A0A1W2PRD5 423 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 A0A1W2PRF3 423 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 A0A1W2PRM7 423 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 CXorf65A6NEN9 183 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 H0Y980 276 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 TRIM77I1YAP6 450 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 RBFOX2O43251 390 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMG9-207ENST00000598860 PGLYRP1O75594 196 aaPredicted RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 DHFRP00374 187 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 IGLV2-14P01704 120 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 ANXA3P12429 323 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 F2RP25116 425 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 BRS3P32247 399 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 MC5RP33032 325 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 DUTP33316 252 aaKnown RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 RAB13P51153 203 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 HILS1P60008 231 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 PRB3Q04118 309 aaPredicted RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 CBX3Q13185 183 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 EIF4EBP1Q13541 118 aaPredicted RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 AANATQ16613 207 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 RTL8BQ17RB0 113 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 PHLDA2Q53GA4 152 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 RPL39P5Q59GN2 51 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 RUSC1-AS1Q66K80 236 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 DHRS7BQ6IAN0 325 aaPredicted RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 CCBE1Q6UXH8 406 aaPredicted RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 RBMS3Q6XE24 437 aaKnown RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 TMED4Q7Z7H5 227 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 LHFPL4Q7Z7J7 247 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 SLC25A42Q86VD7 318 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 SGPP2Q8IWX5 399 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 PDZD9Q8IXQ8 264 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 CD300LFQ8TDQ1 290 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 CHPT1Q8WUD6 406 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 TCTEX1D2Q8WW35 142 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 C22orf15Q8WYQ4 148 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 GALNT14Q96FL9 552 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 RTBDNQ9BSG5 229 aaPredicted RBP8.3□□□□□ -1.08
SMG9-207ENST00000598860 MARVELD1Q9BSK0 173 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 NAA60Q9H7X0 242 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 ZNRD1Q9P1U0 126 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 KCNIP3Q9Y2W7 256 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 FAM96BQ9Y3D0 163 aa8.3□□□□□ -1.08
SMG9-207ENST00000598860 TRAV6A0A075B6T7 132 aa8.29□□□□□ -1.08
SMG9-207ENST00000598860 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
SMG9-207ENST00000598860 A0A1W2PPI3 338 aa8.29□□□□□ -1.08
SMG9-207ENST00000598860 CRYM-AS1A6NIL9 109 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms