RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 MRGPRFQ96AM1 343 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 DGCR14Q96DF8 476 aaKnown RBP13.68□□□□□ -0.22
USHBP1-209ENST00000598570 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
USHBP1-209ENST00000598570 RCC1LQ96I51 464 aaKnown RBP13.68□□□□□ -0.22
USHBP1-209ENST00000598570 COMMD9Q9P000 198 aa13.68□□□□□ -0.22
USHBP1-209ENST00000598570 A0A1B0GW64 132 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 A0A1W2PN81 502 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 M0QYG6 137 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 CNIH1O95406 144 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 DUS4LO95620 317 aaKnown RBP13.67□□□□□ -0.22
USHBP1-209ENST00000598570 NQO2P16083 231 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 CHRNA7P36544 502 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 TSPAN5P62079 268 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 ECSCRQ19T08 205 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 RNASE10Q5GAN6 216 aaKnown RBP13.67□□□□□ -0.22
USHBP1-209ENST00000598570 OR2B11Q5JQS5 317 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 VKORC1L1Q8N0U8 176 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 TTC9CQ8N5M4 171 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 ADAD2Q8NCV1 583 aaKnown RBP13.67□□□□□ -0.22
USHBP1-209ENST00000598570 OR4D10Q8NGI6 311 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 TERB2Q8NHR7 220 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 SRSF12Q8WXF0 261 aaKnown RBP13.67□□□□□ -0.22
USHBP1-209ENST00000598570 DCUN1D5Q9BTE7 237 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 C6orf62Q9GZU0 229 aaPredicted RBP13.67□□□□□ -0.22
USHBP1-209ENST00000598570 GNB4Q9HAV0 340 aa13.67□□□□□ -0.22
USHBP1-209ENST00000598570 TRBV9A0A0B4J1U6 114 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 TEX22C9J3V5 150 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 G3V4G9 280 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 ETV6P41212 452 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 KHDC1LQ5JSQ8 128 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 STEAP1BQ6NZ63 245 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 CCDC190Q86UF4 302 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 POC5Q8NA72 575 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 GRPEL2Q8TAA5 225 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 SPIN2AQ99865 258 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 SPIN2BQ9BPZ2 258 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 NDUFA13Q9P0J0 144 aa13.66□□□□□ -0.22
USHBP1-209ENST00000598570 ANKRD20A5PA0PJZ0 165 aa13.65□□□□□ -0.22
USHBP1-209ENST00000598570 CGB1A6NKQ9 187 aa13.65□□□□□ -0.22
USHBP1-209ENST00000598570 E7EUB6 86 aa13.65□□□□□ -0.22
USHBP1-209ENST00000598570 UPK2O00526 184 aa13.65□□□□□ -0.22
USHBP1-209ENST00000598570 PF4P02776 101 aa13.65□□□□□ -0.22
USHBP1-209ENST00000598570 CRYGCP07315 174 aa13.65□□□□□ -0.22
USHBP1-209ENST00000598570 MEF2DQ14814 521 aa13.65□□□□□ -0.22
USHBP1-209ENST00000598570 V9GYH0 126 aa13.65□□□□□ -0.22
USHBP1-209ENST00000598570 FABP12A6NFH5 140 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 NUDT19A8MXV4 375 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 S1PR2O95136 353 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 RAB3DO95716 219 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 RLN1P04808 185 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 IFNA6P05013 189 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 LGALS1P09382 135 aaKnown RBP13.64□□□□□ -0.23
USHBP1-209ENST00000598570 CD33P20138 364 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 RPL8P62917 257 aaKnown RBP13.64□□□□□ -0.23
USHBP1-209ENST00000598570 EGFEM1PQ0D2K5 195 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 IL18Q14116 193 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 TNXAQ16473 311 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 OXLD1Q5BKU9 147 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 OR51H1Q8NH63 302 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 SRSF8Q9BRL6 282 aaKnown RBP13.64□□□□□ -0.23
USHBP1-209ENST00000598570 SLC2A9Q9NRM0 540 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 SLC2A8Q9NY64 477 aa13.64□□□□□ -0.23
USHBP1-209ENST00000598570 NPIPB5A8MRT5 1133 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 MPPED1O15442 326 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 OR9G9P0C7N8 305 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 HLA-GP17693 338 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 OR2B8PP59922 312 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 GNB1P62873 340 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 SURF2Q15527 256 aaPredicted RBP13.63□□□□□ -0.23
USHBP1-209ENST00000598570 OR5T1Q8NG75 326 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 OR1N2Q8NGR9 330 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 ABHD5Q8WTS1 349 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 USMG5Q96IX5 58 aa13.63□□□□□ -0.23
USHBP1-209ENST00000598570 A0A0G2JLM5 398 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 RBMXL2O75526 392 aaKnown RBP13.62□□□□□ -0.23
USHBP1-209ENST00000598570 IGKV1-39P01597 117 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 IGKV1D-39P04432 117 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 AKAIN1P0CW23 69 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 IGLL1P15814 213 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 CD40LGP29965 261 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 ECI1P42126 302 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 LPAR6P43657 344 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 DEFA6Q01524 100 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 ZNF79Q15937 498 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 DEFB136Q30KP8 78 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 RNASE12Q5GAN4 147 aaKnown RBP13.62□□□□□ -0.23
USHBP1-209ENST00000598570 C10orf55Q5SWW7 151 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 FOXB2Q5VYV0 432 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 TBC1D26Q86UD7 250 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 OR11H1Q8NG94 326 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 DEDD2Q8WXF8 326 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 TRIM63Q969Q1 353 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 SEC22AQ96IW7 307 aa13.62□□□□□ -0.23
USHBP1-209ENST00000598570 MCRIP2Q9BUT9 160 aaKnown RBP13.62□□□□□ -0.23
USHBP1-209ENST00000598570 TGP01266 2768 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 TRAV3A0A0B4J244 114 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 MARCH11A6NNE9 402 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 ACTL6BO94805 426 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 OR8U8P0C7N1 319 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms