RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SPAG16Q8N0X2 631 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 OR9G4Q8NGQ1 327 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 SLC25A46Q96AG3 418 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 FYTTD1Q96QD9 318 aaKnown RBP11.52□□□□□ -0.57
LIG1-215ENST00000597901 AIFM2Q9BRQ8 373 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 RSRP1Q9BUV0 290 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 FUNDC2Q9BWH2 189 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 IFT46Q9NQC8 304 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 ADAM30Q9UKF2 790 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 U3KQK5 164 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 FAM223BA6NKX1 122 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 TEX22C9J3V5 150 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 SULT1C2O00338 296 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 GNRHRP30968 328 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 PRSS3P35030 304 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 RPL27AP46776 148 aaKnown RBP11.51□□□□□ -0.57
LIG1-215ENST00000597901 TAS2R20P59543 309 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 FAM223AQ8IWN6 122 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 NECAP1Q8NC96 275 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 KCTD12Q96CX2 325 aaKnown RBP11.51□□□□□ -0.57
LIG1-215ENST00000597901 SLC2A9Q9NRM0 540 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 ZNF257Q9Y2Q1 563 aa11.51□□□□□ -0.57
LIG1-215ENST00000597901 A0A1B0GW64 132 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 RBFOX2O43251 390 aaKnown RBP eCLIP11.5□□□□□ -0.57
LIG1-215ENST00000597901 OR2J3O76001 311 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 HPRT1P00492 218 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 PMP2P02689 132 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 CSN3P07498 182 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 ZNF735P0CB33 412 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 MYOD1P15172 320 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 NAT1P18440 290 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 NCS1P62166 190 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 RPEL1Q2QD12 228 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 ZNF818PQ6ZRF7 136 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 LYSMD2Q8IV50 215 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 Q8N1Y9 231 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 OR4A5Q8NH83 315 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 BET1LQ9NYM9 111 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 EHFQ9NZC4 300 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 COMMD3Q9UBI1 195 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 ANAPC10Q9UM13 185 aa11.5□□□□□ -0.57
LIG1-215ENST00000597901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.49□□□□□ -0.57
LIG1-215ENST00000597901 DPPA5A6NC42 116 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 EIF4EP06730 217 aaKnown RBP11.49□□□□□ -0.57
LIG1-215ENST00000597901 CRYGCP07315 174 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 HLA-GP17693 338 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 TAS2R31P59538 309 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 HERV-K104P61576 105 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 VBP1P61758 197 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 RPL8P62917 257 aaKnown RBP11.49□□□□□ -0.57
LIG1-215ENST00000597901 CATR1Q13166 79 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 EXOSC2Q13868 293 aaKnown RBP11.49□□□□□ -0.57
LIG1-215ENST00000597901 C19orf35Q6ZS72 473 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 TMEM17Q86X19 198 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 CMTM3Q96MX0 182 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 ZNF2Q9BSG1 426 aaPredicted RBP11.49□□□□□ -0.57
LIG1-215ENST00000597901 FBXL7Q9UJT9 491 aa11.49□□□□□ -0.57
LIG1-215ENST00000597901 TRAV3A0A0B4J244 114 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 SMIM31A0A1B0GVY4 71 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 BMPR1BO00238 502 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 UPK2O00526 184 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 PGLYRP1O75594 196 aaPredicted RBP11.48□□□□□ -0.57
LIG1-215ENST00000597901 NDUFB8O95169 186 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 AREGP15514 252 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 NQO2P16083 231 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 PSMB6P28072 239 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 POU2AF1Q16633 256 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 OR5H2Q8NGV7 314 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 OR6F1Q8NGZ6 308 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 OR51H1Q8NH63 302 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 CD300LFQ8TDQ1 290 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 BORCS5Q969J3 196 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 PLEKHA2Q9HB19 425 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 HRASLSQ9HDD0 168 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 SIGLEC8Q9NYZ4 499 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 DMRT1Q9Y5R6 373 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 COL7A1Q02388 2944 aa11.48□□□□□ -0.57
LIG1-215ENST00000597901 CGB1A6NKQ9 187 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 H0Y980 276 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 APOA1P02647 267 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 FRMD6-AS1P0C7T7 363 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 CTRB1P17538 263 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 HLA-DMAP28067 261 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 MECP2P51608 486 aaKnown RBP11.47□□□□□ -0.57
LIG1-215ENST00000597901 TAS2R46P59540 309 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 KLK9Q2XQG4 91 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 AADACL3Q5VUY0 350 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 CTRB2Q6GPI1 263 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 GPX8Q8TED1 209 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 MOB3AQ96BX8 217 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 KLK9Q9UKQ9 250 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 TNCP24821 2201 aa11.47□□□□□ -0.57
LIG1-215ENST00000597901 OR2C1O95371 312 aa11.46□□□□□ -0.57
LIG1-215ENST00000597901 DHFRP00374 187 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms