RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 U3KQK5 164 aa9.96□□□□□ -0.82
LIG1-212ENST00000596549 FAM223BA6NKX1 122 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 BMPR1BO00238 502 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 ACTL6BO94805 426 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 EIF4EP06730 217 aaKnown RBP9.95□□□□□ -0.82
LIG1-212ENST00000596549 ZNF735P0CB33 412 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 NHLRC4P0CG21 123 aaPredicted RBP9.95□□□□□ -0.82
LIG1-212ENST00000596549 CBX5P45973 191 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 RPL27AP46776 148 aaKnown RBP9.95□□□□□ -0.82
LIG1-212ENST00000596549 SBSPONQ8IVN8 264 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 FAM223AQ8IWN6 122 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 SLC25A46Q96AG3 418 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 FUNDC2Q9BWH2 189 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 SLC5A7Q9GZV3 580 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 FXYD6Q9H0Q3 95 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 VCX3AQ9NNX9 186 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 DMRT1Q9Y5R6 373 aa9.95□□□□□ -0.82
LIG1-212ENST00000596549 NPIPB5A8MRT5 1133 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 SULT1C2O00338 296 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 RBFOX2O43251 390 aaKnown RBP eCLIP9.94□□□□□ -0.824e-6■□□□□ 9.1
LIG1-212ENST00000596549 OR2J3O76001 311 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 FRMD6-AS1P0C7T7 363 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 SMIM18P0DKX4 95 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 AREGP15514 252 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 KIR2DS2P43631 304 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 TMEM69Q5SWH9 247 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 OR4A47Q6IF82 309 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 SPAG16Q8N0X2 631 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 Q8N1Y9 231 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 ZBTB34Q8NCN2 500 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 GIMAP1Q8WWP7 306 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 S100A16Q96FQ6 103 aaKnown RBP9.94□□□□□ -0.82
LIG1-212ENST00000596549 ELOVL1Q9BW60 279 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 IFT46Q9NQC8 304 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 BET1LQ9NYM9 111 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 EHFQ9NZC4 300 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 ZNF257Q9Y2Q1 563 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
LIG1-212ENST00000596549 TRAV3A0A0B4J244 114 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 S1PR2O95136 353 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 CSN3P07498 182 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 NAT1P18440 290 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 EDN2P20800 178 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 MAS1LP35410 378 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 VBP1P61758 197 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 CATR1Q13166 79 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 POU2AF1Q16633 256 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 RPEL1Q2QD12 228 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 C15orf32Q32M92 178 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 ADAMTSL5Q6ZMM2 481 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 ANKRD13BQ86YJ7 626 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 OR51H1Q8NH63 302 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 MOB3AQ96BX8 217 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 CCDC140Q96MF4 163 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 FANCD2OSQ96PS1 177 aa9.93□□□□□ -0.82
LIG1-212ENST00000596549 FYTTD1Q96QD9 318 aaKnown RBP9.93□□□□□ -0.82
LIG1-212ENST00000596549 THAP7Q9BT49 309 aaPredicted RBP9.93□□□□□ -0.82
LIG1-212ENST00000596549 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.92□□□□□ -0.82
LIG1-212ENST00000596549 PPP5D1E7EU14 171 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 HRASP01112 189 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 PMP2P02689 132 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 RLN1P04808 185 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 CRYGCP07315 174 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 CTRB1P17538 263 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 HLA-GP17693 338 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 GNRHRP30968 328 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 RFX2P48378 723 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 RPL8P62917 257 aaKnown RBP9.92□□□□□ -0.82
LIG1-212ENST00000596549 CTRB2Q6GPI1 263 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 KCTD12Q96CX2 325 aaKnown RBP9.92□□□□□ -0.82
LIG1-212ENST00000596549 ZNF2Q9BSG1 426 aaPredicted RBP9.92□□□□□ -0.82
LIG1-212ENST00000596549 NAA50Q9GZZ1 169 aaKnown RBP9.92□□□□□ -0.82
LIG1-212ENST00000596549 SLC2A9Q9NRM0 540 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 SIGLEC8Q9NYZ4 499 aa9.92□□□□□ -0.82
LIG1-212ENST00000596549 IGLC7A0M8Q6 106 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 IZUMO1RA6ND01 250 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 NDUFB8O95169 186 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 HPRT1P00492 218 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 IGHV3-23P01764 117 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 REG1AP05451 166 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 IGHV4-30-4P0DP06 118 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 PSMB6P28072 239 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 TAS2R31P59538 309 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 OR2B8PP59922 312 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 HERV-K104P61576 105 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 ATP5G2Q06055 141 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 KLK9Q2XQG4 91 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 AADACL3Q5VUY0 350 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 SLC25A42Q86VD7 318 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 OR4A5Q8NH83 315 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 GPX8Q8TED1 209 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 TMEM140Q9NV12 185 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 COMMD3Q9UBI1 195 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 FBXL7Q9UJT9 491 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 KLK9Q9UKQ9 250 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 S4R3C0 116 aa9.91□□□□□ -0.82
LIG1-212ENST00000596549 TENM3Q9P273 2699 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 IGLV11-55A0A075B6I3 123 aa9.9□□□□□ -0.82
LIG1-212ENST00000596549 MFSD2BA6NFX1 497 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms