RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 ZNF491Q8N8L2 437 aa14.23□□□□□ -0.13
ZNF558-204ENST00000596172 KLHL30-AS1Q8NEE0 82 aa14.23□□□□□ -0.13
ZNF558-204ENST00000596172 BET1LQ9NYM9 111 aa14.23□□□□□ -0.13
ZNF558-204ENST00000596172 COMMD9Q9P000 198 aa14.23□□□□□ -0.13
ZNF558-204ENST00000596172 ANKRD20A5PA0PJZ0 165 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 NUDT19A8MXV4 375 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 H3BUA1 57 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 ACTL6BO94805 426 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 IL6RP08887 468 aaPredicted RBP14.22□□□□□ -0.13
ZNF558-204ENST00000596172 FGF2P09038 288 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 CD40LGP29965 261 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 MYCNOSP40205 109 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 ETV6P41212 452 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 RND3P61587 244 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 TNXAQ16473 311 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 C18orf65Q6ZTR6 163 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 C4orf3Q8WVX3 66 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 SLA2Q9H6Q3 261 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 VSIG4Q9Y279 399 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 V9GYH0 126 aa14.22□□□□□ -0.13
ZNF558-204ENST00000596172 MSGN1A6NI15 193 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 PF4P02776 101 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 AKAIN1P0CW23 69 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 RUNX1Q01196 453 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 ZNF585BQ52M93 769 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 PHLDA2Q53GA4 152 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 ASPHD1Q5U4P2 390 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 FOXB2Q5VYV0 432 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 OR4A47Q6IF82 309 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 ETV3LQ6ZN32 361 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 C8orf86Q6ZUL3 223 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 ZFAND1Q8TCF1 268 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 SRSF12Q8WXF0 261 aaKnown RBP14.21□□□□□ -0.13
ZNF558-204ENST00000596172 SPIN2AQ99865 258 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 SPIN2BQ9BPZ2 258 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 THAP7Q9BT49 309 aaPredicted RBP14.21□□□□□ -0.13
ZNF558-204ENST00000596172 SLC2A9Q9NRM0 540 aa14.21□□□□□ -0.13
ZNF558-204ENST00000596172 DISC1C4P0D8 188 aa14.2□□□□□ -0.14
ZNF558-204ENST00000596172 S1PR2O95136 353 aa14.2□□□□□ -0.14
ZNF558-204ENST00000596172 PGAM2P15259 253 aa14.2□□□□□ -0.14
ZNF558-204ENST00000596172 ECI1P42126 302 aa14.2□□□□□ -0.14
ZNF558-204ENST00000596172 TBC1D26Q86UD7 250 aa14.2□□□□□ -0.14
ZNF558-204ENST00000596172 OR6Q1Q8NGQ2 317 aa14.2□□□□□ -0.14
ZNF558-204ENST00000596172 P2RX4Q99571 388 aa14.2□□□□□ -0.14
ZNF558-204ENST00000596172 MEGF8Q7Z7M0 2845 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 I3L521 148 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 MPPED1O15442 326 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 LPAR6P43657 344 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 RPL8P62917 257 aaKnown RBP14.19□□□□□ -0.14
ZNF558-204ENST00000596172 SURF2Q15527 256 aaPredicted RBP14.19□□□□□ -0.14
ZNF558-204ENST00000596172 SCGB2B2Q4G0G5 96 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 PYDC2Q56P42 97 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 SPANXN2Q5MJ10 180 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 SSX9Q7RTT3 188 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 Q8N402 240 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 LINC00482Q8N8I6 264 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 OR4C16Q8NGL9 310 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 RAX2Q96IS3 184 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 PRRT1Q99946 306 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 SLC2A8Q9NY64 477 aa14.19□□□□□ -0.14
ZNF558-204ENST00000596172 TNCP24821 2201 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 CCL24O00175 119 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 UPK2O00526 184 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 HLA-GP17693 338 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 ERVK-16P61578 105 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 ZNF79Q15937 498 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 MRPL41Q8IXM3 137 aaKnown RBP14.18□□□□□ -0.14
ZNF558-204ENST00000596172 DMBX1Q8NFW5 382 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 OR5T1Q8NG75 326 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 DEDD2Q8WXF8 326 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 MRGPRFQ96AM1 343 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 PHB2Q99623 299 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 HRASLSQ9HDD0 168 aa14.18□□□□□ -0.14
ZNF558-204ENST00000596172 NOTCH1P46531 2555 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 MARCH11A6NNE9 402 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 CTSDP07339 412 aaPredicted RBP14.17□□□□□ -0.14
ZNF558-204ENST00000596172 OR9G9P0C7N8 305 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 CD33P20138 364 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 RPL27AP46776 148 aaKnown RBP14.17□□□□□ -0.14
ZNF558-204ENST00000596172 PIGPP57054 158 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 AP3S2P59780 193 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 FAAP20Q6NZ36 180 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 TTC9CQ8N5M4 171 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 ADAD2Q8NCV1 583 aaKnown RBP14.17□□□□□ -0.14
ZNF558-204ENST00000596172 OR13C8Q8NGS7 320 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 TRIM63Q969Q1 353 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 GNB4Q9HAV0 340 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 TMEM140Q9NV12 185 aa14.17□□□□□ -0.14
ZNF558-204ENST00000596172 TEX22C9J3V5 150 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 B3GALNT1O75752 331 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 TRGV3P03979 118 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 RPA2P15927 270 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 PI3P19957 117 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 PPP5CP53041 499 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 FHL3Q13643 280 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 KLF9Q13886 244 aaPredicted RBP14.16□□□□□ -0.14
ZNF558-204ENST00000596172 C10orf55Q5SWW7 151 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 SAMD5Q5TGI4 173 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 SLC25A42Q86VD7 318 aa14.16□□□□□ -0.14
ZNF558-204ENST00000596172 CCDC71LQ8N9Z2 235 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms