RNA–Protein interactions for RNA: ENST00000594693.5

ZNF548-204, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-204ENST00000594693 GALNT14Q96FL9 552 aa13.9□□□□□ -0.18
ZNF548-204ENST00000594693 ZNF430Q9H8G1 570 aaPredicted RBP13.9□□□□□ -0.18
ZNF548-204ENST00000594693 TENM1Q9UKZ4 2725 aa13.9□□□□□ -0.18
ZNF548-204ENST00000594693 MARCH11A6NNE9 402 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 KBTBD11O94819 623 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 CDS2O95674 445 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 KRASP01116 189 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 OR5AC1P0C628 307 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 AKR1C4P17516 323 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 CRIP2P52943 208 aaPredicted RBP13.89□□□□□ -0.19
ZNF548-204ENST00000594693 SUPT4H1P63272 117 aaKnown RBP13.89□□□□□ -0.19
ZNF548-204ENST00000594693 TMEM128Q5BJH2 165 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 MMD2Q8IY49 270 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 C3orf56Q8N813 242 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 DMBX1Q8NFW5 382 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 CHPT1Q8WUD6 406 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 SEC22AQ96IW7 307 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 TMEM222Q9H0R3 208 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 LINC00527Q9UJ94 153 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 KCNIP3Q9Y2W7 256 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 FBXO7Q9Y3I1 522 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 NUBP2Q9Y5Y2 271 aa13.89□□□□□ -0.19
ZNF548-204ENST00000594693 UPK2O00526 184 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 ATP6V0E1O15342 81 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 CREBL2O60519 120 aaPredicted RBP13.88□□□□□ -0.19
ZNF548-204ENST00000594693 FGF2P09038 288 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 G6PCP35575 357 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 ERVK-16P61578 105 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 TMED4Q7Z7H5 227 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 SLC25A42Q86VD7 318 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 OR5AU1Q8NGC0 362 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 SGMS2Q8NHU3 365 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 PARP11Q9NR21 331 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 TMEM140Q9NV12 185 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 FLVCR2Q9UPI3 526 aa13.88□□□□□ -0.19
ZNF548-204ENST00000594693 TRAV3A0A0B4J244 114 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 CNIH1O95406 144 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 MAS1LP35410 378 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 CFHR3Q02985 330 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 SRSF4Q08170 494 aaKnown RBP13.87□□□□□ -0.19
ZNF548-204ENST00000594693 TMEM187Q14656 261 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 C19orf54Q5BKX5 351 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 MZT2BQ6NZ67 158 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 CENPSQ8N2Z9 138 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 ARPC1AQ92747 370 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 CITED1Q99966 193 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 GON7Q9BXV9 100 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 STAB1Q9NY15 2570 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 PLXNB1O43157 2135 aa13.87□□□□□ -0.19
ZNF548-204ENST00000594693 PSMB11A5LHX3 300 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 G3V318 75 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 TCRBP04435 133 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 PPIFP30405 207 aaKnown RBP13.86□□□□□ -0.19
ZNF548-204ENST00000594693 GNB1P62873 340 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 RPL8P62917 257 aaKnown RBP13.86□□□□□ -0.19
ZNF548-204ENST00000594693 TMEM267Q0VDI3 215 aaPredicted RBP13.86□□□□□ -0.19
ZNF548-204ENST00000594693 TRIM16LQ309B1 348 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 AKIRIN2Q53H80 203 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 C10orf99Q6UWK7 81 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 ZNF329Q86UD4 541 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 SELENOHQ8IZQ5 122 aaKnown RBP13.86□□□□□ -0.19
ZNF548-204ENST00000594693 MINDY2Q8NBR6 621 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 LHFPL5Q8TAF8 219 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 FAM103A1Q9BTL3 118 aaKnown RBP13.86□□□□□ -0.19
ZNF548-204ENST00000594693 WSB1Q9Y6I7 421 aa13.86□□□□□ -0.19
ZNF548-204ENST00000594693 TNCP24821 2201 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 TRAV41A0A0B4J266 112 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 MSGN1A6NI15 193 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 ACTL6BO94805 426 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 ATG12O94817 140 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 IGKV1-5P01602 117 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 P0C879 139 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 HLA-GP17693 338 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 VDAC1P21796 283 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 UBE2MP61081 183 aaKnown RBP13.85□□□□□ -0.19
ZNF548-204ENST00000594693 SLC35B1P78383 322 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 TNXAQ16473 311 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 SHISA2Q6UWI4 295 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 TSC22D3Q99576 134 aa13.85□□□□□ -0.19
ZNF548-204ENST00000594693 ALX4Q9H161 411 aaPredicted RBP13.85□□□□□ -0.19
ZNF548-204ENST00000594693 FAM240BA0A1B0GVZ2 78 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 E7EUB6 86 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 SFT2D2O95562 160 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 OR9G9P0C7N8 305 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 ANXA3P12429 323 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 PPP1R1AQ13522 171 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 TCTEX1D4Q5JR98 221 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 H2BFWTQ7Z2G1 175 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 COMMD1Q8N668 190 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 LFNGQ8NES3 379 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 GRPEL2Q8TAA5 225 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 SRSF12Q8WXF0 261 aaKnown RBP13.84□□□□□ -0.19
ZNF548-204ENST00000594693 RBPMSQ93062 196 aaKnown RBP13.84□□□□□ -0.19
ZNF548-204ENST00000594693 IL22RA2Q969J5 263 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 TMEM68Q96MH6 324 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 DNHD1Q96M86 4753 aa13.84□□□□□ -0.19
ZNF548-204ENST00000594693 A0A1B0GW64 132 aa13.83□□□□□ -0.2
ZNF548-204ENST00000594693 SNAPC5O75971 98 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms