RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 IGHV3-72A0A0B4J1Y9 119 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 A0A1W2PPI3 338 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 HRASP01112 189 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 OR9G9P0C7N8 305 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 MC5RP33032 325 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 UBE2KP61086 200 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 MOB3BQ86TA1 216 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 BAP18Q8IXM2 172 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 TMEM252Q8N6L7 170 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 MAPK1IP1LQ8NDC0 245 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 OSR1Q8TAX0 266 aaPredicted RBP12.25□□□□□ -0.45
VRK3-207ENST00000594092 FLYWCH2Q96CP2 140 aaKnown RBP12.25□□□□□ -0.45
VRK3-207ENST00000594092 Q96MF0 132 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 SMIM3Q9BZL3 60 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 TMEM140Q9NV12 185 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 HECTD1Q9ULT8 2610 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 IGSF23A1L1A6 192 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 SHOXO15266 292 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 TMEM50AO95807 157 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 IAPPP10997 89 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 RAB13P51153 203 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 PAX9P55771 341 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 NHLH2Q02577 135 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 BAXQ07812 192 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 MINOS1Q5TGZ0 78 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 CLEC9AQ6UXN8 241 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 SLC7A5P1Q8MH63 180 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 LINC01356Q8N9X3 169 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 OR4C13Q8NGP0 309 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 OR4A16Q8NH70 328 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 AIFM2Q9BRQ8 373 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 HIF1ANQ9NWT6 349 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 HILPDAQ9Y5L2 63 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 MINOS1-NBL1R4GNA1 71 aa12.25□□□□□ -0.45
VRK3-207ENST00000594092 ITPR2Q14571 2701 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 TRAV20A0A0B4J274 112 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 JTBO76095 146 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 LGALS4P56470 323 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 TAS2R30P59541 319 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 CLLU1Q5K131 121 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 RPL7L1Q6DKI1 246 aaKnown RBP12.24□□□□□ -0.45
VRK3-207ENST00000594092 OR4A47Q6IF82 309 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 SMIM8Q96KF7 97 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 RBKSQ9H477 322 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 PSENENQ9NZ42 101 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 CACFD1Q9UGQ2 172 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 PDZD2O15018 2839 aa12.24□□□□□ -0.45
VRK3-207ENST00000594092 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.24□□□□□ -0.451e-9■■■■■ 27.5
VRK3-207ENST00000594092 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 CENPVL3A0A0U1RRI6 287 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 TIMM23O14925 209 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 RELBQ01201 579 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 STX12Q86Y82 276 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 DYNAPQ8N1N2 210 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 C17orf50Q8WW18 174 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 TBL2Q9Y4P3 447 aaKnown RBP12.23□□□□□ -0.45
VRK3-207ENST00000594092 AUP1Q9Y679 476 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 RPS10-NUDT3A0A1W2PQS6 291 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 IL6RP08887 468 aaPredicted RBP12.23□□□□□ -0.45
VRK3-207ENST00000594092 PAX6P26367 422 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 OR2B8PP59922 312 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 RPS16P62249 146 aaKnown RBP12.23□□□□□ -0.45
VRK3-207ENST00000594092 AARDQ4LEZ3 155 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 BSCL2Q96G97 398 aaPredicted RBP12.23□□□□□ -0.45
VRK3-207ENST00000594092 QTRT1Q9BXR0 403 aaKnown RBP12.23□□□□□ -0.45
VRK3-207ENST00000594092 MS4A7Q9GZW8 240 aaPredicted RBP12.23□□□□□ -0.45
VRK3-207ENST00000594092 C7orf69Q9H7B7 122 aa12.23□□□□□ -0.45
VRK3-207ENST00000594092 SVEP1Q4LDE5 3571 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 PRRC2AP48634 2157 aaKnown RBP12.22□□□□□ -0.45
VRK3-207ENST00000594092 CR1P17927 2039 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 OOSP1A8MZH6 123 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 H3BP45 60 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 SAA1P0DJI8 122 aaPredicted RBP12.22□□□□□ -0.45
VRK3-207ENST00000594092 GATA3P23771 443 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 SSX2Q16385 188 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 PUSL1Q8N0Z8 303 aaKnown RBP12.22□□□□□ -0.45
VRK3-207ENST00000594092 DTD1Q8TEA8 209 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 CFHR4Q92496 578 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 AJUBAQ96IF1 538 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 RITA1Q96K30 269 aa12.22□□□□□ -0.45
VRK3-207ENST00000594092 CIB3Q96Q77 187 aaPredicted RBP12.22□□□□□ -0.45
VRK3-207ENST00000594092 CEBPZOSA8MTT3 80 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 NPFFO15130 113 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 CST7O76096 145 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 IFNA17P01571 189 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 IGLV2-23P01705 113 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 SAA4P35542 130 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 SULT1A1P50225 295 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 HABP2Q14520 560 aaPredicted RBP12.21□□□□□ -0.45
VRK3-207ENST00000594092 EIF5AL1Q6IS14 154 aaKnown RBP12.21□□□□□ -0.45
VRK3-207ENST00000594092 ZNF429Q86V71 674 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 UBAC2Q8NBM4 344 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 OR52E5Q8NH55 327 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 SLC25A32Q9H2D1 315 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 BET1LQ9NYM9 111 aa12.21□□□□□ -0.45
VRK3-207ENST00000594092 CCDC168Q8NDH2 2452 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 C15orf61A6NNL5 157 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms