RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 MSMO1Q15800 293 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 TNXAQ16473 311 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 SAMD12Q8N8I0 201 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 OR2K2Q8NGT1 345 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 OSR1Q8TAX0 266 aaPredicted RBP11.18□□□□□ -0.62
PNKP-202ENST00000593706 DYNLRB2Q8TF09 96 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 ACOT12Q8WYK0 555 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 DIABLOQ9NR28 239 aa11.18□□□□□ -0.62
PNKP-202ENST00000593706 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 J3QRK9 145 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 OR9G9P0C7N8 305 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 CTF1Q16619 201 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 PRSS8Q16651 343 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 VMA21Q3ZAQ7 101 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 IDO2Q6ZQW0 420 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 KCTD9Q7L273 389 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 TEX45Q8NA69 505 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 ADAD2Q8NCV1 583 aaKnown RBP11.17□□□□□ -0.62
PNKP-202ENST00000593706 KCTD12Q96CX2 325 aaKnown RBP11.17□□□□□ -0.62
PNKP-202ENST00000593706 NEURL2Q9BR09 285 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 HIPK2Q9H2X6 1198 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 SLC2A8Q9NY64 477 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 FRAS1Q86XX4 4008 aa11.17□□□□□ -0.62
PNKP-202ENST00000593706 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 ACTL6BO94805 426 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 GABARAPO95166 117 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 EIF4EP06730 217 aaKnown RBP11.16□□□□□ -0.62
PNKP-202ENST00000593706 SAA1P0DJI8 122 aaPredicted RBP11.16□□□□□ -0.62
PNKP-202ENST00000593706 CBX5P45973 191 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 TAS2R20P59543 309 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 VBP1P61758 197 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 RHOGP84095 191 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 LAX1Q8IWV1 398 aa11.16□□□□□ -0.62
PNKP-202ENST00000593706 SRSF12Q8WXF0 261 aaKnown RBP11.16□□□□□ -0.62
PNKP-202ENST00000593706 S100A16Q96FQ6 103 aaKnown RBP11.16□□□□□ -0.62
PNKP-202ENST00000593706 HSD17B10Q99714 261 aaKnown RBP11.16□□□□□ -0.62
PNKP-202ENST00000593706 NAA50Q9GZZ1 169 aaKnown RBP11.16□□□□□ -0.62
PNKP-202ENST00000593706 BMPR1BO00238 502 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 CREBL2O60519 120 aaPredicted RBP11.15□□□□□ -0.62
PNKP-202ENST00000593706 FCGR3BO75015 233 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 RBMXL2O75526 392 aaKnown RBP11.15□□□□□ -0.62
PNKP-202ENST00000593706 PPYP01298 95 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 PRH1P02810 166 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 NAT1P18440 290 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 FCGR2CP31995 323 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 ARPC4P59998 168 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 ATP5G2Q06055 141 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 GUCA2BQ16661 112 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 CD300EQ496F6 205 aaPredicted RBP11.15□□□□□ -0.62
PNKP-202ENST00000593706 TMEM69Q5SWH9 247 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 OR5AP2Q8NGF4 316 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 GPHA2Q96T91 129 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 ZNF430Q9H8G1 570 aaPredicted RBP11.15□□□□□ -0.62
PNKP-202ENST00000593706 AKIP1Q9NQ31 210 aa11.15□□□□□ -0.62
PNKP-202ENST00000593706 MEIS3P1A6NDR6 274 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 FCER2P06734 321 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 CDK10Q15131 360 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 ZNF66Q6ZN08 573 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 MFSD4AQ8N468 514 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 GIMAP1Q8WWP7 306 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 CMTM3Q96MX0 182 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 WFDC10AQ9H1F0 79 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 SRD5A3Q9H8P0 318 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 CCL28Q9NRJ3 127 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 TAS2R8Q9NYW2 309 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 PRELID3BQ9Y3B1 194 aa11.14□□□□□ -0.63
PNKP-202ENST00000593706 APOA1P02647 267 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 CD7P09564 240 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 ALDH3B2P48448 385 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 C10orf55Q5SWW7 151 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 VKORC1L1Q8N0U8 176 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 PUSL1Q8N0Z8 303 aaKnown RBP11.13□□□□□ -0.63
PNKP-202ENST00000593706 OR4S2Q8NH73 311 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 TCTEX1D2Q8WW35 142 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 SPIN2AQ99865 258 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 SPIN2BQ9BPZ2 258 aa11.13□□□□□ -0.63
PNKP-202ENST00000593706 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
PNKP-202ENST00000593706 A0A1B0GW64 132 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 OR11H12B2RN74 326 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 PPP5D1E7EU14 171 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 RBFOX2O43251 390 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■■□ 23.3
PNKP-202ENST00000593706 MECP2P51608 486 aaKnown RBP11.12□□□□□ -0.63
PNKP-202ENST00000593706 ZNF45Q02386 682 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 DHRS11Q6UWP2 260 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 LINC00322Q6ZN03 302 aaPredicted RBP11.12□□□□□ -0.63
PNKP-202ENST00000593706 ZNF818PQ6ZRF7 136 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 NECAP1Q8NC96 275 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 SECTM1Q8WVN6 248 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 DCUN1D5Q9BTE7 237 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 COMMD3Q9UBI1 195 aa11.12□□□□□ -0.63
PNKP-202ENST00000593706 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.11□□□□□ -0.63
PNKP-202ENST00000593706 TRBV9A0A0B4J1U6 114 aa11.11□□□□□ -0.63
PNKP-202ENST00000593706 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
PNKP-202ENST00000593706 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
PNKP-202ENST00000593706 TEX22C9J3V5 150 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms