RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 TOP2BQ02880 1626 aa0.78□□□□□ -2.29
HMGN1P30-201ENST00000589286 CCDC180Q9P1Z9 1646 aa0.78□□□□□ -2.29
HMGN1P30-201ENST00000589286 STRCQ7RTU9 1775 aa0.78□□□□□ -2.29
HMGN1P30-201ENST00000589286 CFAP47Q6ZTR5 3102 aa0.78□□□□□ -2.29
HMGN1P30-201ENST00000589286 XIRP2A4UGR9 3374 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 MICAL3Q7RTP6 2002 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 DMDP11532 3685 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 ZNF292O60281 2723 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 RANBP2P49792 3224 aaKnown RBP0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 A0A0A6YYH2 397 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 C5orf49A4QMS7 147 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 OR6C6A6NF89 314 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 A6NJ64 397 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 KLRC4O43908 158 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 ZNF737O75373 536 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 HLA-DRAP01903 254 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 CRPP02741 224 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 IL6P05231 212 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 COX5BP10606 129 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 GPX2P18283 190 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 DDTP30046 118 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 RPL27AP46776 148 aaKnown RBP0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 EMP1P54849 157 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 CXCR4P61073 352 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 FKBP1AP62942 108 aaKnown RBP0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 HLA-DRB3P79483 266 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 HOXC5Q00444 222 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 JOSD1Q15040 202 aaPredicted RBP0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 FAM151BQ6UXP7 276 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 SPATA12Q7Z6I5 190 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 KTN1-AS1Q86SY8 53 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 LRRC34Q8IZ02 419 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 HAVCR2Q8TDQ0 301 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 RNASE6Q93091 150 aaKnown RBP0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 Q96M85 177 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 TIPINQ9BVW5 301 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 DERL2Q9GZP9 239 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 TMEM222Q9H0R3 208 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 HES4Q9HCC6 221 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 C15orf41Q9Y2V0 281 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 RAPGEF6Q8TEU7 1601 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 CACNA1AO00555 2505 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 UNC79Q9P2D8 2635 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 CHD6Q8TD26 2715 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 CDH23Q9H251 3354 aa0.77□□□□□ -2.29
HMGN1P30-201ENST00000589286 ASPMQ8IZT6 3477 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 DNAH12Q6ZR08 3092 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 PPRC1Q5VV67 1664 aaKnown RBP0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 EPRSP07814 1512 aaKnown RBP0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 CLASP1Q7Z460 1538 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 ABCC10Q5T3U5 1492 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 FANCD2Q9BXW9 1451 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 A0A087WUU8 490 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 TMED7-TICAM2A0A0A6YYA0 188 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 C9JCJ5 164 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 KRT75O95678 551 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 IL3P08700 152 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 ALDH3A1P30838 453 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 GABRA2P47869 451 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 CDK9P50750 372 aaKnown RBP0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 TMEM33P57088 247 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 PLPPR5Q32ZL2 321 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 TNFAIP8L2Q6P589 184 aaPredicted RBP0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 LYZL1Q6UWQ5 148 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 GPHB5Q86YW7 130 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 BAP18Q8IXM2 172 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 DAND5Q8N907 189 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 TMEM161BQ8NDZ6 487 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 JOSD2Q8TAC2 188 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 EEF1AKMT1Q8WVE0 214 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 TMA16Q96EY4 203 aaKnown RBP0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 SFRP2Q96HF1 295 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 VCX3BQ9H321 246 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 MED9Q9NWA0 146 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 DNAH14Q0VDD8 3507 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 MUC3AQ02505 3323 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 WDFY3Q8IZQ1 3526 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 MYOFQ9NZM1 2061 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 DLG5Q8TDM6 1919 aa0.76□□□□□ -2.29
HMGN1P30-201ENST00000589286 FRYQ5TBA9 3013 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 MGAQ8IWI9 3026 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 LAMC3Q9Y6N6 1575 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 LRRC7Q96NW7 1537 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 RELNP78509 3460 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 PKD1L2Q7Z442 2459 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 ABCC12Q96J65 1359 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 ABCC11Q96J66 1382 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 VPS13AQ96RL7 3174 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 ARFGEF3Q5TH69 2177 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 IGKV2D-26A0A0A0MRZ7 120 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 CXCR6O00574 342 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 SSNA1O43805 119 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 MRPS14O60783 128 aaKnown RBP0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 APOMO95445 188 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 TYMSP04818 313 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 SERPINA7P05543 415 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 TPM3P06753 285 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 CCR2P41597 374 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms