RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CYP2G1PQ6ZSU1 146 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 SEM1Q6ZVN7 128 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 WFDC3Q8IUB2 231 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 ZNRF1Q8ND25 227 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 OR5AN1Q8NGI8 311 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 NANPQ8TBE9 248 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 Q8WTZ3 238 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 CORO2AQ92828 525 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 C5orf30Q96GV9 206 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 BTF3L4Q96K17 158 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 DIRC2Q96SL1 478 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 QTRT1Q9BXR0 403 aaKnown RBP6.13□□□□□ -1.43
ZNF540-206ENST00000589117 MKRN2OSH3BPM6 223 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 KBTBD11O94819 623 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 VENTXO95231 258 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 TNFRSF1AP19438 455 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 RND2P52198 227 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 TMPRSS3P57727 454 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 LOXL3P58215 753 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 ADIRFQ15847 76 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 BSXQ3C1V8 233 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 KIAA2026Q5HYC2 2103 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 WDR25Q64LD2 544 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-206ENST00000589117 LRP11Q86VZ4 500 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 OR4F5Q8NH21 305 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 ITLN1Q8WWA0 313 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 RAB1CQ92928 201 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 OR4F4Q96R69 305 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 SLC25A22Q9H936 323 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 WDR83OSQ9Y284 106 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 CELSR3Q9NYQ7 3312 aa6.12□□□□□ -1.43
ZNF540-206ENST00000589117 TRBV24-1A0A075B6N3 115 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 IGHV3OR15-7A0A075B7D8 119 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 A8MXE2 369 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 PRRG2O14669 202 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 MT-CO2P00403 227 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 TFF1P04155 84 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 EGR1P18146 543 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 HOXA5P20719 270 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 CEACAM8P31997 349 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-206ENST00000589117 OPRK1P41145 380 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 CDX1P47902 265 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-206ENST00000589117 ATP5IP56385 69 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-206ENST00000589117 CD81P60033 236 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 ERVFRD-1P60508 538 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 HNF4GQ14541 408 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 ACSM6Q6P461 480 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 SSX9Q7RTT3 188 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 FAM57AQ8TBR7 257 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 FAM222BQ8WU58 562 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 NEIL1Q96FI4 390 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-206ENST00000589117 SDSLQ96GA7 329 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 DCTN5Q9BTE1 182 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 NPVFQ9HCQ7 196 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 FAM215AQ9Y5M1 114 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 TRGV8A0A0C4DH27 118 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 ZNF729A6NN14 1252 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-206ENST00000589117 C15orf62A8K5M9 175 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 SEC14L6B5MCN3 397 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 PPP1R2P9O14990 202 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 KLK10O43240 276 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 OR9G9P0C7N8 305 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 MDKP21741 143 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-206ENST00000589117 NDUFA6P56556 154 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 RTL8BQ17RB0 113 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 RPUSD4Q96CM3 377 aaKnown RBP6.11□□□□□ -1.43
ZNF540-206ENST00000589117 GCM1Q9NP62 436 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 TMEM140Q9NV12 185 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 C19orf73Q9NVV2 129 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 GAR1Q9NY12 217 aaKnown RBP6.11□□□□□ -1.43
ZNF540-206ENST00000589117 FKBP11Q9NYL4 201 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 ELOVL5Q9NYP7 299 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 CACNA1GO43497 2377 aa6.11□□□□□ -1.43
ZNF540-206ENST00000589117 TGIF2-C20orf24A0A0A6YYL0 155 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 A0A1W2PPE3 182 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 hADV38S2A0JD32 116 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 NKX6-3A6NJ46 265 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 C11orf94C9JXX5 98 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 F6UZH7 168 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 H7BYZ3 331 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 IGKV1D-33P01593 117 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 IGKV1-33P01594 117 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 HSPE1P61604 102 aaKnown RBP6.1□□□□□ -1.43
ZNF540-206ENST00000589117 MRPS11P82912 194 aaKnown RBP6.1□□□□□ -1.43
ZNF540-206ENST00000589117 TFF3Q07654 80 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 RPL39P5Q59GN2 51 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 SPINK9Q5DT21 86 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 FAM53AQ6NSI3 398 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-206ENST00000589117 ZNF343Q6P1L6 599 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 KCNIP4Q6PIL6 250 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 SSX7Q7RTT5 188 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 NUP37Q8NFH4 326 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 OR10A7Q8NGE5 316 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 Q8TCH9 128 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 TMEM204Q9BSN7 226 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 IFI27L2Q9H2X8 130 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 NIT2Q9NQR4 276 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 PRNDQ9UKY0 176 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 CACNA1DQ01668 2161 aa6.1□□□□□ -1.43
ZNF540-206ENST00000589117 C15orf61A6NNL5 157 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms