RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 OR2A7Q96R45 310 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 SRRQ9GZT4 340 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 KLK15Q9H2R5 256 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 A0A1W2PN81 502 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 IL6RP08887 468 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-207ENST00000588542 NQO2P16083 231 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 CHRNA7P36544 502 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 KLF9Q13886 244 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-207ENST00000588542 KIAA0141Q14154 515 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-207ENST00000588542 TNXAQ16473 311 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 ASPHD1Q5U4P2 390 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 UNQ5815/PRO19632Q6UWF5 114 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 MMD2Q8IY49 270 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 OR51S1Q8NGJ8 323 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 OR13C8Q8NGS7 320 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 VSTM2AQ8TAG5 236 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 MYOZ3Q8TDC0 251 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 SLC2A8Q9NY64 477 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 COMMD9Q9P000 198 aa15.77■□□□□ 0.12
DDX39A-207ENST00000588542 FOXA2Q9Y261 457 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-207ENST00000588542 S100GP29377 79 aa15.76■□□□□ 0.11
DDX39A-207ENST00000588542 LPAR6P43657 344 aa15.76■□□□□ 0.11
DDX39A-207ENST00000588542 OR4A47Q6IF82 309 aa15.76■□□□□ 0.11
DDX39A-207ENST00000588542 OR4F17Q8NGA8 305 aa15.76■□□□□ 0.11
DDX39A-207ENST00000588542 OR4F4Q96R69 305 aa15.76■□□□□ 0.11
DDX39A-207ENST00000588542 AIFM2Q9BRQ8 373 aa15.76■□□□□ 0.11
DDX39A-207ENST00000588542 FAM212BQ9NTI7 297 aaPredicted RBP15.76■□□□□ 0.11
DDX39A-207ENST00000588542 BET1LQ9NYM9 111 aa15.76■□□□□ 0.11
DDX39A-207ENST00000588542 MPPED1O15442 326 aa15.75■□□□□ 0.11
DDX39A-207ENST00000588542 CREBL2O60519 120 aaPredicted RBP15.75■□□□□ 0.11
DDX39A-207ENST00000588542 PIGPP57054 158 aa15.75■□□□□ 0.11
DDX39A-207ENST00000588542 CNPY1Q3B7I2 92 aa15.75■□□□□ 0.11
DDX39A-207ENST00000588542 C10orf55Q5SWW7 151 aa15.75■□□□□ 0.11
DDX39A-207ENST00000588542 ZFAND1Q8TCF1 268 aa15.75■□□□□ 0.11
DDX39A-207ENST00000588542 SRSF12Q8WXF0 261 aaKnown RBP15.75■□□□□ 0.11
DDX39A-207ENST00000588542 SDHCQ99643 169 aaPredicted RBP15.75■□□□□ 0.11
DDX39A-207ENST00000588542 PRRT1Q99946 306 aa15.75■□□□□ 0.11
DDX39A-207ENST00000588542 TRAV3A0A0B4J244 114 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 MSGN1A6NI15 193 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 CTSDP07339 412 aaPredicted RBP15.74■□□□□ 0.11
DDX39A-207ENST00000588542 PF4V1P10720 104 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 ECI1P42126 302 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 CDX1P47902 265 aaPredicted RBP15.74■□□□□ 0.11
DDX39A-207ENST00000588542 RAB9AP51151 201 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 KLHL30-AS1Q8NEE0 82 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 OR5M8Q8NGP6 311 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 OR4A5Q8NH83 315 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 CASTOR1Q8WTX7 329 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 RTBDNQ9BSG5 229 aaPredicted RBP15.74■□□□□ 0.11
DDX39A-207ENST00000588542 HRASLSQ9HDD0 168 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 GPR132Q9UNW8 380 aa15.74■□□□□ 0.11
DDX39A-207ENST00000588542 MARCH11A6NNE9 402 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 E7EUB6 86 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 IGKV1-39P01597 117 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 IGKV1D-39P04432 117 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 RPA2P15927 270 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 SURF2Q15527 256 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-207ENST00000588542 BAK1Q16611 211 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 TMEM65Q6PI78 240 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 ETV3LQ6ZN32 361 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 C8orf86Q6ZUL3 223 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 ZNF695Q8IW36 515 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 TOMM5Q8N4H5 51 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 ZNF491Q8N8L2 437 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 GDPD1Q8N9F7 314 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 OR5T1Q8NG75 326 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 TMEM68Q96MH6 324 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 TMEM140Q9NV12 185 aa15.73■□□□□ 0.11
DDX39A-207ENST00000588542 A0A1B0GW64 132 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 UPK2O00526 184 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 ACTL6BO94805 426 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 APELAP0DMC3 54 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 MYOD1P15172 320 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 MAS1LP35410 378 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 AP3S2P59780 193 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 RPL8P62917 257 aaKnown RBP15.72■□□□□ 0.11
DDX39A-207ENST00000588542 CADM3Q8N126 398 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 DMBX1Q8NFW5 382 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 TP53RKQ96S44 253 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 C5orf66Q9H5L9 145 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 MCUBQ9NWR8 336 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 SCP2D1Q9UJQ7 156 aa15.72■□□□□ 0.11
DDX39A-207ENST00000588542 CGB1A6NKQ9 187 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 NUDT19A8MXV4 375 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 TEX22C9J3V5 150 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 H0Y980 276 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 KRASP01116 189 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 HLA-GP17693 338 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 SLC6A1P30531 599 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 G6PCP35575 357 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 RPL27AP46776 148 aaKnown RBP15.71■□□□□ 0.11
DDX39A-207ENST00000588542 CCDC71LQ8N9Z2 235 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 UBE2E2Q96LR5 201 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 PHB2Q99623 299 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 GNB4Q9HAV0 340 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 COPZ2Q9P299 210 aa15.71■□□□□ 0.11
DDX39A-207ENST00000588542 C3orf85A0A1B0GTC6 90 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 FGF2P09038 288 aa15.7■□□□□ 0.1
DDX39A-207ENST00000588542 FAUP35544 74 aaKnown RBP15.7■□□□□ 0.1
DDX39A-207ENST00000588542 ERVK-16P61578 105 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms