RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 FAM219AQ8IW50 185 aa7.17□□□□□ -1.26
CIRBP-218ENST00000588344 PUSL1Q8N0Z8 303 aaKnown RBP7.17□□□□□ -1.26
CIRBP-218ENST00000588344 IL22RA2Q969J5 263 aa7.17□□□□□ -1.26
CIRBP-218ENST00000588344 R3HDM4Q96D70 268 aa7.17□□□□□ -1.26
CIRBP-218ENST00000588344 RRNAD1Q96FB5 475 aaKnown RBP7.17□□□□□ -1.26
CIRBP-218ENST00000588344 SPIN2AQ99865 258 aa7.17□□□□□ -1.26
CIRBP-218ENST00000588344 SPIN2BQ9BPZ2 258 aa7.17□□□□□ -1.26
CIRBP-218ENST00000588344 ZNF747Q9BV97 191 aa7.17□□□□□ -1.26
CIRBP-218ENST00000588344 TMEM222Q9H0R3 208 aa7.17□□□□□ -1.26
CIRBP-218ENST00000588344 ALX4Q9H161 411 aaPredicted RBP7.17□□□□□ -1.26
CIRBP-218ENST00000588344 FCN1O00602 326 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 S1PR2O95136 353 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 CA2P00918 260 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 TCRBP04435 133 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 IL6RP08887 468 aaPredicted RBP7.16□□□□□ -1.26
CIRBP-218ENST00000588344 VDAC1P21796 283 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 RAB25P57735 213 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 RPL8P62917 257 aaKnown RBP7.16□□□□□ -1.26
CIRBP-218ENST00000588344 THOC7Q6I9Y2 204 aaKnown RBP7.16□□□□□ -1.26
CIRBP-218ENST00000588344 OR4A47Q6IF82 309 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 SHISA2Q6UWI4 295 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 Q6ZS46 218 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 H2BFWTQ7Z2G1 175 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 LGI3Q8N145 548 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 STPG2Q8N412 459 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 DUSP18Q8NEJ0 188 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 OR4X2Q8NGF9 303 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 SGMS2Q8NHU3 365 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 GLYATL2Q8WU03 294 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 ARPC1AQ92747 370 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 RBPMSQ93062 196 aaKnown RBP7.16□□□□□ -1.26
CIRBP-218ENST00000588344 TMEM56Q96MV1 263 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 TP53RKQ96S44 253 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 CLCC1Q96S66 551 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 MDFIQ99750 246 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 SRSF8Q9BRL6 282 aaKnown RBP7.16□□□□□ -1.26
CIRBP-218ENST00000588344 ZNF430Q9H8G1 570 aaPredicted RBP7.16□□□□□ -1.26
CIRBP-218ENST00000588344 PALMDQ9NP74 551 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 TMEM140Q9NV12 185 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 PRNDQ9UKY0 176 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 TMEM56-RWDD3S4R434 201 aa7.16□□□□□ -1.26
CIRBP-218ENST00000588344 TRAV41A0A0B4J266 112 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 DUXBA0A1W2PPF3 345 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 PSMB11A5LHX3 300 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 SH2D7A6NKC9 451 aaPredicted RBP7.15□□□□□ -1.26
CIRBP-218ENST00000588344 UPK2O00526 184 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 ELANEP08246 267 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 OR5AC1P0C628 307 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 HLA-GP17693 338 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 BTCP35070 178 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 G6PCP35575 357 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 SP6Q3SY56 376 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 TEX38Q6PEX7 206 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 SSX9Q7RTT3 188 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 HSD17B13Q7Z5P4 300 aaPredicted RBP7.15□□□□□ -1.26
CIRBP-218ENST00000588344 MRPL41Q8IXM3 137 aaKnown RBP7.15□□□□□ -1.26
CIRBP-218ENST00000588344 VKORC1L1Q8N0U8 176 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 KLHDC1Q8N7A1 406 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 LRTM2Q8N967 370 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 ADAD2Q8NCV1 583 aaKnown RBP7.15□□□□□ -1.26
CIRBP-218ENST00000588344 OR5AU1Q8NGC0 362 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 OR5M8Q8NGP6 311 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 OR4A16Q8NH70 328 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 ENKURQ8TC29 256 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 ABHD5Q8WTS1 349 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 WFDC12Q8WWY7 111 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 SEC22AQ96IW7 307 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 HSPB9Q9BQS6 159 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 COMMD5Q9GZQ3 224 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 PARP11Q9NR21 331 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 ZFP57Q9NU63 452 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 TBC1D24Q9ULP9 559 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 NUBP2Q9Y5Y2 271 aa7.15□□□□□ -1.26
CIRBP-218ENST00000588344 A0A0B4J2A0 478 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 MSGN1A6NI15 193 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 LINC01548A6NM66 108 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 H3BUA1 57 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 ATP6V0E1O15342 81 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 CYB5BO43169 146 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 BRI3O95415 125 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 SFT2D2O95562 160 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 IGKV1-39P01597 117 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 IGHG4P01861 327 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 OPN1MWP04001 364 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 IGKV1D-39P04432 117 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 OR4E1P0C645 316 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 OPN1MW2P0DN77 364 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 OPN1MW3P0DN78 364 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 VAMP1P23763 118 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 MECP2P51608 486 aaKnown RBP7.14□□□□□ -1.27
CIRBP-218ENST00000588344 AKR1C2P52895 323 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 GNB1P62873 340 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 SUPT4H1P63272 117 aaKnown RBP7.14□□□□□ -1.27
CIRBP-218ENST00000588344 PJVKQ0ZLH3 352 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 FOXE3Q13461 319 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 TMEM187Q14656 261 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 TNXAQ16473 311 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 TMEM65Q6PI78 240 aa7.14□□□□□ -1.27
CIRBP-218ENST00000588344 SELENOHQ8IZQ5 122 aaKnown RBP7.14□□□□□ -1.27
CIRBP-218ENST00000588344 MINDY2Q8NBR6 621 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms