RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 C16orf95Q9H693 158 aa12.82□□□□□ -0.36
ATG4D-205ENST00000586477 CACFD1Q9UGQ2 172 aa12.82□□□□□ -0.36
ATG4D-205ENST00000586477 TMEM56-RWDD3S4R434 201 aa12.82□□□□□ -0.36
ATG4D-205ENST00000586477 C9orf170A2RU37 121 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 MARCH11A6NNE9 402 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 RRHO14718 337 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 TSPAN9O75954 239 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 S1PR2O95136 353 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 NDUFA3O95167 84 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 FGF2P09038 288 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 AKR1C2P52895 323 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 SUPT4H1P63272 117 aaKnown RBP12.81□□□□□ -0.36
ATG4D-205ENST00000586477 OXA1LQ15070 435 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 SP6Q3SY56 376 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 ZNF585BQ52M93 769 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 TREML4Q6UXN2 200 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 LRTM2Q8N967 370 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 GLYATL2Q8WU03 294 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 RNF114Q9Y508 228 aa12.81□□□□□ -0.36
ATG4D-205ENST00000586477 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 SNRPGP15A8MWD9 76 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 CHST1O43916 411 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 OR2A4O95047 310 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 BRWD1-AS2P59051 145 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 TMEM187Q14656 261 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 PSG5Q15238 335 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 TMEM219Q86XT9 240 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 ZNF431Q8TF32 576 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-205ENST00000586477 CASTOR1Q8WTX7 329 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 CHPT1Q8WUD6 406 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 OR2A7Q96R45 310 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 RANBP3Q9H6Z4 567 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-205ENST00000586477 BET1LQ9NYM9 111 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 METTL1Q9UBP6 276 aaKnown RBP12.8□□□□□ -0.36
ATG4D-205ENST00000586477 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 NOTCH1P46531 2555 aa12.8□□□□□ -0.36
ATG4D-205ENST00000586477 SLC25A17O43808 307 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 ACTL6BO94805 426 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 KRASP01116 189 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 VSIG10L2P0DP72 767 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 VDAC1P21796 283 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 C5orf64Q2M2E5 130 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 TMEM268Q5VZI3 342 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 H2BFWTQ7Z2G1 175 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 PPP1R27Q86WC6 154 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 MITD1Q8WV92 249 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 LSM10Q969L4 123 aaKnown RBP12.79□□□□□ -0.36
ATG4D-205ENST00000586477 SIGLEC9Q9Y336 463 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 TMED3Q9Y3Q3 217 aa12.79□□□□□ -0.36
ATG4D-205ENST00000586477 KCNAB3O43448 404 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 SNAPC5O75971 98 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 KBTBD11O94819 623 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 IFNA21P01568 189 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 SAA1P0DJI8 122 aaPredicted RBP12.78□□□□□ -0.36
ATG4D-205ENST00000586477 MAS1LP35410 378 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 LIN54Q6MZP7 749 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 MMD2Q8IY49 270 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 FAM71E2Q8N5Q1 922 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 C5orf56Q8N8D9 126 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 PRSS22Q9GZN4 317 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 PLSCR3Q9NRY6 295 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 TMEM140Q9NV12 185 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 FKBP11Q9NYL4 201 aa12.78□□□□□ -0.36
ATG4D-205ENST00000586477 IGLV2-23P01705 113 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 HLA-DRB1P01911 266 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 G6PCP35575 357 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 F2RL1P55085 397 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 OR4A47Q6IF82 309 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 SELENOHQ8IZQ5 122 aaKnown RBP12.77□□□□□ -0.37
ATG4D-205ENST00000586477 PUSL1Q8N0Z8 303 aaKnown RBP12.77□□□□□ -0.37
ATG4D-205ENST00000586477 C12orf45Q8N5I9 185 aaPredicted RBP12.77□□□□□ -0.37
ATG4D-205ENST00000586477 Q8N9W7 124 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 TMEM167AQ8TBQ9 72 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 SEC22AQ96IW7 307 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 SPIN2AQ99865 258 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 SPIN2BQ9BPZ2 258 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 PRNDQ9UKY0 176 aa12.77□□□□□ -0.37
ATG4D-205ENST00000586477 SRRM4A7MD48 611 aaKnown RBP12.76□□□□□ -0.37
ATG4D-205ENST00000586477 TATDN3Q17R31 274 aa12.76□□□□□ -0.37
ATG4D-205ENST00000586477 THOC7Q6I9Y2 204 aaKnown RBP12.76□□□□□ -0.37
ATG4D-205ENST00000586477 SSX9Q7RTT3 188 aa12.76□□□□□ -0.37
ATG4D-205ENST00000586477 SLC35G3Q8N808 338 aa12.76□□□□□ -0.37
ATG4D-205ENST00000586477 OR4A16Q8NH70 328 aa12.76□□□□□ -0.37
ATG4D-205ENST00000586477 RITA1Q96K30 269 aa12.76□□□□□ -0.37
ATG4D-205ENST00000586477 FBXL15Q9H469 300 aa12.76□□□□□ -0.37
ATG4D-205ENST00000586477 C7orf66A4D0T2 115 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 IGKV1-39P01597 117 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 IGKV1D-39P04432 117 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 CRYGBP07316 175 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 SLC25A6P12236 298 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 SPNP16150 400 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 CNTFRP26992 372 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 RPL8P62917 257 aaKnown RBP12.75□□□□□ -0.37
ATG4D-205ENST00000586477 PRSS8Q16651 343 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 ANKRD55Q3KP44 614 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 FBLN7Q53RD9 439 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 ARSJQ5FYB0 599 aaPredicted RBP12.75□□□□□ -0.37
ATG4D-205ENST00000586477 HIST2H2BDQ6DRA6 164 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 ZNF562Q6V9R5 426 aa12.75□□□□□ -0.37
ATG4D-205ENST00000586477 MRPL41Q8IXM3 137 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms