RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 DEFB135Q30KP9 77 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 CTRB2Q6GPI1 263 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 SLC25A42Q86VD7 318 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 TMEM167AQ8TBQ9 72 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 UFD1Q92890 307 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 GINS4Q9BRT9 223 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 OR51E2Q9H255 320 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 TP53TG1Q9Y2A0 90 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 RBMX2Q9Y388 322 aaKnown RBP8.81□□□□□ -1
BRCA1-225ENST00000586385 RBM7Q9Y580 266 aaKnown RBP8.81□□□□□ -1
BRCA1-225ENST00000586385 V9GY05 133 aa8.81□□□□□ -1
BRCA1-225ENST00000586385 KIAA1109Q2LD37 5005 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 IGLV11-55A0A075B6I3 123 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 A0A075B6Q4 140 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 SPRY2O43597 315 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 ACTL6BO94805 426 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 KBTBD11O94819 623 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 HLA-DQB1P01920 261 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 ATF4P18848 351 aaPredicted RBP8.8□□□□□ -1
BRCA1-225ENST00000586385 RPL27AP46776 148 aaKnown RBP8.8□□□□□ -1
BRCA1-225ENST00000586385 OGFRL1Q5TC84 451 aaPredicted RBP8.8□□□□□ -1
BRCA1-225ENST00000586385 Q6ZWC4 215 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 KCTD9Q7L273 389 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 ZNF645Q8N7E2 425 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 FYTTD1Q96QD9 318 aaKnown RBP8.8□□□□□ -1
BRCA1-225ENST00000586385 GPHA2Q96T91 129 aa8.8□□□□□ -1
BRCA1-225ENST00000586385 TRAV25A0A0B4J276 109 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 IGHV3-35A0A0C4DH35 117 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 CREBL2O60519 120 aaPredicted RBP8.79□□□□□ -1
BRCA1-225ENST00000586385 ARL6IP5O75915 188 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 REG1AP05451 166 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 NFYAP23511 347 aaPredicted RBP8.79□□□□□ -1
BRCA1-225ENST00000586385 BMI1P35226 326 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 MRPS15P82914 257 aaKnown RBP8.79□□□□□ -1
BRCA1-225ENST00000586385 PRR20EP86478 221 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 PRR20CP86479 221 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 PRR20DP86480 221 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 PRR20BP86481 221 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 PRR20AP86496 221 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 ARFRP1Q13795 201 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 RCN1Q15293 331 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 ODF3L2Q3SX64 289 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 FAM106AQ4KMX7 169 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 NR2C2APQ86WQ0 139 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 EEF1AKMT3Q96AZ1 226 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 RNF183Q96D59 192 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 OR2A7Q96R45 310 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 DCUN1D5Q9BTE7 237 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 UBQLN2Q9UHD9 624 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 OR2W1Q9Y3N9 320 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 HECTD4Q9Y4D8 3996 aa8.79□□□□□ -1
BRCA1-225ENST00000586385 CASQ2O14958 399 aaPredicted RBP8.78□□□□□ -1
BRCA1-225ENST00000586385 CLEC3BP05452 202 aa8.78□□□□□ -1
BRCA1-225ENST00000586385 HSMCR30P0CW71 290 aa8.78□□□□□ -1
BRCA1-225ENST00000586385 ANKRD55Q3KP44 614 aa8.78□□□□□ -1
BRCA1-225ENST00000586385 ZNF585BQ52M93 769 aa8.78□□□□□ -1
BRCA1-225ENST00000586385 OR1L6Q8NGR2 347 aa8.78□□□□□ -1
BRCA1-225ENST00000586385 ZNF502Q8TBZ5 544 aa8.78□□□□□ -1
BRCA1-225ENST00000586385 ZNF414Q96IQ9 312 aa8.78□□□□□ -1
BRCA1-225ENST00000586385 DUSP21Q9H596 190 aa8.78□□□□□ -1
BRCA1-225ENST00000586385 VPS13DQ5THJ4 4388 aa8.77□□□□□ -1
BRCA1-225ENST00000586385 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 IFITM5A6NNB3 132 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 RAB6AP20340 208 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 GALP22466 123 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 DTYMKP23919 212 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 GPR183P32249 361 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 MAS1LP35410 378 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 OR2B8PP59922 312 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 MLLT11Q13015 90 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-225ENST00000586385 SSX1Q16384 188 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 LGALS9CQ6DKI2 356 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 OR4A47Q6IF82 309 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 SSX9Q7RTT3 188 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 OR2C3Q8N628 320 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 OR4S2Q8NH73 311 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 PHLDA1Q8WV24 401 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-225ENST00000586385 MARC2Q969Z3 335 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 ZNF436Q9C0F3 470 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-225ENST00000586385 C5orf66Q9H5L9 145 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 MRPL27Q9P0M9 148 aaKnown RBP8.77□□□□□ -1.01
BRCA1-225ENST00000586385 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-225ENST00000586385 PRELID3BQ9Y3B1 194 aa8.77□□□□□ -1.01
BRCA1-225ENST00000586385 TRBV7-1A0A0A6YYK4 115 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 TRAV3A0A0B4J244 114 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 KIR2DL5BA0A0G2JN68 375 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 KIR2DL5BA0A0G2JPC4 375 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 DPPA5A6NC42 116 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 UBE2CO00762 179 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 TSPAN4O14817 238 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 SSX5O60225 188 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 HIST1H1BP16401 226 aaKnown RBP8.76□□□□□ -1.01
BRCA1-225ENST00000586385 CD36P16671 472 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 GADD45AP24522 165 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 PSMA1P25786 263 aaKnown RBP8.76□□□□□ -1.01
BRCA1-225ENST00000586385 FCGR2BP31994 310 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-225ENST00000586385 MAP2K4P45985 399 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 APOC4P55056 127 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 RPL8P62917 257 aaKnown RBP8.76□□□□□ -1.01
BRCA1-225ENST00000586385 TRAM1Q15629 374 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms