RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 HRASP01112 189 aa16.42■□□□□ 0.22
PPP4R1-228ENST00000584074 IL6RP08887 468 aaPredicted RBP16.42■□□□□ 0.22
PPP4R1-228ENST00000584074 ZNF818PQ6ZRF7 136 aa16.42■□□□□ 0.22
PPP4R1-228ENST00000584074 RSRP1Q9BUV0 290 aa16.42■□□□□ 0.22
PPP4R1-228ENST00000584074 TRBV9A0A0B4J1U6 114 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 A0A1B0GW64 132 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 FAM223BA6NKX1 122 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 PMP2P02689 132 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 GP9P14770 177 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 PRSS3P35030 304 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 RPL27AP46776 148 aaKnown RBP16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 SYNJ2BPP57105 145 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 HERV-K104P61576 105 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 DHRS11Q6UWP2 260 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 C19orf35Q6ZS72 473 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 FAM223AQ8IWN6 122 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 FYTTD1Q96QD9 318 aaKnown RBP16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 ASCL2Q99929 193 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 SMAD5-AS1Q9Y6J3 95 aa16.41■□□□□ 0.22
PPP4R1-228ENST00000584074 TNCP24821 2201 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 RBFOX2O43251 390 aaKnown RBP eCLIP16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 SMIM18P0DKX4 95 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 MYOD1P15172 320 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 NAT1P18440 290 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 GNRHRP30968 328 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 MAS1LP35410 378 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 ATP5G2Q06055 141 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 EXOSC2Q13868 293 aaKnown RBP16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 OR4A47Q6IF82 309 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 OR51H1Q8NH63 302 aa16.4■□□□□ 0.22
PPP4R1-228ENST00000584074 IGLV1-51P01701 117 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 APOA1P02647 267 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 ZNF735P0CB33 412 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 NHLRC4P0CG21 123 aaPredicted RBP16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 RPL8P62917 257 aaKnown RBP16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 CATR1Q13166 79 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 IL34Q6ZMJ4 242 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 SLC25A42Q86VD7 318 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 ANKRD13BQ86YJ7 626 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 LYSMD2Q8IV50 215 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 NECAP1Q8NC96 275 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 OR9G4Q8NGQ1 327 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 OR5H2Q8NGV7 314 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 ZNF2Q9BSG1 426 aaPredicted RBP16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 NAA50Q9GZZ1 169 aaKnown RBP16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 ZNF257Q9Y2Q1 563 aa16.39■□□□□ 0.21
PPP4R1-228ENST00000584074 DPPA5A6NC42 116 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 OR2J3O76001 311 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 AREGP15514 252 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 HLA-GP17693 338 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 TAS2R46P59540 309 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 RPEL1Q2QD12 228 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 AADACL3Q5VUY0 350 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 MOB3AQ96BX8 217 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 AIFM2Q9BRQ8 373 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 HRASLSQ9HDD0 168 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 SLC2A9Q9NRM0 540 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 BET1LQ9NYM9 111 aa16.38■□□□□ 0.21
PPP4R1-228ENST00000584074 SMIM31A0A1B0GVY4 71 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 NPIPB5A8MRT5 1133 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 BMPR1BO00238 502 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 HPGDSO60760 199 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 HPRT1P00492 218 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 ELK1P19419 428 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 HLA-DMAP28067 261 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 TAS2R31P59538 309 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 C15orf32Q32M92 178 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 SNX29P2Q8IUI4 249 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 GPX8Q8TED1 209 aa16.37■□□□□ 0.21
PPP4R1-228ENST00000584074 TRAV3A0A0B4J244 114 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 CGB1A6NKQ9 187 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 S1PR2O95136 353 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 HRH1P35367 487 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 RORCP51449 518 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 CTF1Q16619 201 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 POU2AF1Q16633 256 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 OR4A5Q8NH83 315 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 BORCS5Q969J3 196 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 CMTM3Q96MX0 182 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 U3KQK5 164 aa16.36■□□□□ 0.21
PPP4R1-228ENST00000584074 TENM3Q9P273 2699 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 PGLYRP1O75594 196 aaPredicted RBP16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 RLN1P04808 185 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 REG1AP05451 166 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 RPA2P15927 270 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 NQO2P16083 231 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 PSMB6P28072 239 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 TATDN3Q17R31 274 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 OR6F1Q8NGZ6 308 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 CD300LFQ8TDQ1 290 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 FANCD2OSQ96PS1 177 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 FXYD6Q9H0Q3 95 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 PLEKHA2Q9HB19 425 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 FBXL7Q9UJT9 491 aa16.35■□□□□ 0.21
PPP4R1-228ENST00000584074 UPK2O00526 184 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 GABARAPO95166 117 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 NDUFB8O95169 186 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 CRYGCP07315 174 aa16.34■□□□□ 0.21
PPP4R1-228ENST00000584074 CSN3P07498 182 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms