RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 TNFAIP8O95379 198 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 KRT75O95678 551 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CLIC3O95833 236 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 TSPAN13O95857 204 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 HTR1AP08908 422 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 PET100P0DJ07 73 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 PGA4P0DJD7 388 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 PGA3P0DJD8 388 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 NQO1P15559 274 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 PPIBP23284 216 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 MAS1LP35410 378 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 POLR2IP36954 125 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 RBM34P42696 430 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 RANBP1P43487 201 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 IDH2P48735 452 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 CDC34P49427 236 aaPredicted RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 DAPP51397 102 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 UBE2MP61081 183 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 UBE2KP61086 200 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 ELF3P78545 371 aaPredicted RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 ADARB1P78563 741 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 PRKCDQ05655 676 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 FMODQ06828 376 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 RPL18Q07020 188 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 ECH1Q13011 328 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CLINT1Q14677 625 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 TRAM2Q15035 370 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 BCL2A1Q16548 175 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 RGS21Q2M5E4 152 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 LIN52Q52LA3 116 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 SMUG1Q53HV7 270 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 OGFRL1Q5TC84 451 aaPredicted RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 C1orf140Q5VVS0 124 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 KDM4DQ6B0I6 523 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 GLYATQ6IB77 296 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 C3orf33Q6P1S2 294 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 ZFP1Q6P2D0 407 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 PLET1Q6UQ28 207 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 FBXW12Q6X9E4 464 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 ASCL4Q6XD76 172 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 OR2W3Q7Z3T1 314 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 GRINAQ7Z429 371 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 ARPINQ7Z6K5 226 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 OAFQ86UD1 273 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 STX12Q86Y82 276 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CALHM1Q8IU99 346 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 SYS1Q8N2H4 156 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 MS4A15Q8N5U1 240 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 TMEM156Q8N614 296 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 WDR31Q8NA23 367 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CYB561A3Q8NBI2 242 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 ATP6V1C2Q8NEY4 427 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 OR4K5Q8NGD3 323 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 OR6K6Q8NGW6 343 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 OR10R2Q8NGX6 335 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 OR10J6PQ8NGY7 276 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 OR10D3Q8NH80 312 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 LINC01560Q8TB33 94 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CIRBP-AS1Q8TBR5 109 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 LGALS14Q8TCE9 139 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 PYDC1Q8WXC3 89 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CMTM5Q96DZ9 223 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 ZFP3Q96NJ6 502 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 TSPAN32Q96QS1 320 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CAMK2N2Q96S95 79 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 AMELYQ99218 206 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 PITX2Q99697 317 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 COPS4Q9BT78 406 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 THTPAQ9BU02 230 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 MAP1LC3CQ9BXW4 147 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 TBL1XR1Q9BZK7 514 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 NAA50Q9GZZ1 169 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 EFCAB1Q9HAE3 211 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 NMNAT1Q9HAN9 279 aaPredicted RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 RETNQ9HD89 108 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 FGF20Q9NP95 211 aaPredicted RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 ARMC1Q9NVT9 282 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 MCUBQ9NWR8 336 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 USE1Q9NZ43 259 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CCDC59Q9P031 241 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 MRM2Q9UI43 246 aaKnown RBP1.6□□□□□ -2.15
VAPA-206ENST00000583475 PRELID1Q9Y255 219 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 ANGPT4Q9Y264 503 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 CFL2Q9Y281 166 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 SLC35A3Q9Y2D2 325 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 SIGLEC9Q9Y336 463 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 PUS1Q9Y606 427 aaKnown RBP eCLIP1.6□□□□□ -2.15
VAPA-206ENST00000583475 V9GYQ6 96 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 NBEAL1Q6ZS30 2694 aa1.6□□□□□ -2.15
VAPA-206ENST00000583475 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 TRAV27A0A087WT01 109 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 A0A096LNT2 108 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 TRGV5A0A0B4J1U4 118 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 A0A1B0GTI1 187 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 DHRS12A0PJE2 317 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 TRAPPC13A5PLN9 417 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 SLC22A20A6NK97 555 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 KLRC4-KLRK1H3BQV0 150 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 TP53I11O14683 189 aa1.59□□□□□ -2.15
VAPA-206ENST00000583475 MPDU1O75352 247 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms