RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RAB18Q9NP72 206 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 COMMD9Q9P000 198 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 TMED3Q9Y3Q3 217 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 ALG5Q9Y673 324 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 YLPM1P49750 1951 aaKnown RBP6.42□□□□□ -1.38
COPS3-215ENST00000578317 CR1P17927 2039 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 HIVEP2P31629 2446 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 IGHV3OR16-10A0A075B7F0 116 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 PRSS29PA6NIE9 313 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 H7C2Y5 167 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 VENTXO95231 258 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 MOSP00540 346 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 HRASP01112 189 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 IGKV1-39P01597 117 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 IGKV1D-39P04432 117 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 IL6RP08887 468 aaPredicted RBP6.41□□□□□ -1.38
COPS3-215ENST00000578317 FGF2P09038 288 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 SLC25A6P12236 298 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 NQO2P16083 231 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 CBX3Q13185 183 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 SCGB2A2Q13296 93 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 SLC9A3R2Q15599 337 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 CLEC9AQ6UXN8 241 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 ZNF695Q8IW36 515 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 FAM219AQ8IW50 185 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 OR8H1Q8NGG4 311 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 OR2T10Q8NGZ9 312 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 LHFPL5Q8TAF8 219 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 CASTOR1Q8WTX7 329 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 SEC22AQ96IW7 307 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 SMR3AQ99954 134 aa6.41□□□□□ -1.38
COPS3-215ENST00000578317 SRRM4A7MD48 611 aaKnown RBP6.4□□□□□ -1.38
COPS3-215ENST00000578317 CRYZL1O95825 349 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 P0C879 139 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 MTORP42345 2549 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 NMSQ5H8A3 153 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 TMEM268Q5VZI3 342 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 LYZL2Q7Z4W2 148 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 Q8N6K4 173 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 NPBQ8NG41 125 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 TSNAXQ99598 290 aaKnown RBP6.4□□□□□ -1.38
COPS3-215ENST00000578317 SSX3Q99909 188 aa6.4□□□□□ -1.38
COPS3-215ENST00000578317 SONP18583 2426 aaKnown RBP6.4□□□□□ -1.39
COPS3-215ENST00000578317 F8P00451 2351 aa6.4□□□□□ -1.39
COPS3-215ENST00000578317 IGHV3-72A0A0B4J1Y9 119 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 A0A1B0GU03 582 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 MARCH11A6NNE9 402 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SSNA1O43805 119 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 S1PR2O95136 353 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SPDEFO95238 335 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 KRASP01116 189 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 IFNA21P01568 189 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 IGKV1-5P01602 117 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 CRYGBP07316 175 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 TRAPPC2P0DI81 140 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 TRAPPC2BP0DI82 140 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SULT1A3P0DMM9 295 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SULT1A4P0DMN0 295 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SRP14P37108 136 aaKnown RBP6.39□□□□□ -1.39
COPS3-215ENST00000578317 UBE2KP61086 200 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 RRAS2P62070 204 aaPredicted RBP6.39□□□□□ -1.39
COPS3-215ENST00000578317 LRRC75BQ2VPJ9 315 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 DEFB112Q30KQ8 113 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 OR2B11Q5JQS5 317 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 Q6YL49 198 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SLC35G3Q8N808 338 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 TEX45Q8NA69 505 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 OR4A5Q8NH83 315 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 OR5R1Q8NH85 324 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 VSTM2AQ8TAG5 236 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 ASB13Q8WXK3 278 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 R3HDM4Q96D70 268 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 RRNAD1Q96FB5 475 aaKnown RBP6.39□□□□□ -1.39
COPS3-215ENST00000578317 RITA1Q96K30 269 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 MED28Q9H204 178 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 PLSCR3Q9NRY6 295 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 COA4Q9NYJ1 87 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 BET1LQ9NYM9 111 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 CACFD1Q9UGQ2 172 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 PITPNC1Q9UKF7 332 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 MMP24Q9Y5R2 645 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SOX21Q9Y651 276 aaPredicted RBP6.39□□□□□ -1.39
COPS3-215ENST00000578317 ZFHX3Q15911 3703 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 A0A087WWL8 130 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 A0A1B0GVG6 124 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 HMX3A6NHT5 357 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 C9orf118A6NHY6 69 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 OR2A4O95047 310 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 NDUFA3O95167 84 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 IGKV1D-33P01593 117 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 IGKV1-33P01594 117 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 IGLV2-23P01705 113 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SNRNP70P08621 437 aaKnown RBP6.39□□□□□ -1.39
COPS3-215ENST00000578317 PAX6P26367 422 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 IER3P46695 156 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 ERVK-16P61578 105 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SRSF4Q08170 494 aaKnown RBP6.39□□□□□ -1.39
COPS3-215ENST00000578317 AARDQ4LEZ3 155 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 LIN54Q6MZP7 749 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 PUSL1Q8N0Z8 303 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms