RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CASTOR1Q8WTX7 329 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 MITD1Q8WV92 249 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 RRNAD1Q96FB5 475 aaKnown RBP8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 RHOVQ96L33 236 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 BEX1Q9HBH7 125 aa8.93□□□□□ -0.98
TRAPPC8-204ENST00000578252 C7orf66A4D0T2 115 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 NCBP2LA6PVI3 153 aaKnown RBP8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 SLC25A17O43808 307 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 OR2A4O95047 310 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 KRASP01116 189 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 IGKV1-39P01597 117 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 IGLV2-23P01705 113 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 IGKV1D-39P04432 117 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 RNASE1P07998 156 aaKnown RBP8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 SAA1P0DJI8 122 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 PLGLAQ15195 96 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 TATDN3Q17R31 274 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 C5orf64Q2M2E5 130 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 ANKRD55Q3KP44 614 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 TMEM219Q86XT9 240 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 SELENOHQ8IZQ5 122 aaKnown RBP8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 FAM71E2Q8N5Q1 922 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 DMBX1Q8NFW5 382 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 RNASE11Q8TAA1 199 aaKnown RBP8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 LSM10Q969L4 123 aaKnown RBP8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 SEC22AQ96IW7 307 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 OR2A7Q96R45 310 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 RASL11BQ9BPW5 248 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 SEC22CQ9BRL7 303 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 CHIAQ9BZP6 476 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 PLSCR3Q9NRY6 295 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 BET1LQ9NYM9 111 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 METTL1Q9UBP6 276 aaKnown RBP8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 TMED3Q9Y3Q3 217 aa8.92□□□□□ -0.98
TRAPPC8-204ENST00000578252 NIPBLQ6KC79 2804 aaeCLIP8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 SRRM4A7MD48 611 aaKnown RBP8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 TRIM77I1YAP6 450 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 GPR137BO60478 399 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 IFNA21P01568 189 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 VDAC1P21796 283 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 F2RL1P55085 397 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 UBA52P62987 128 aaKnown RBP8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 OR4A47Q6IF82 309 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 H2BFWTQ7Z2G1 175 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 PPP1R27Q86WC6 154 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 PUSL1Q8N0Z8 303 aaKnown RBP8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 C12orf45Q8N5I9 185 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 SLC35G3Q8N808 338 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 C5orf56Q8N8D9 126 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 Q8N9W7 124 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 OR52B4Q8NGK2 314 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 LHFPL5Q8TAF8 219 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 TMEM167AQ8TBQ9 72 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 RITA1Q96K30 269 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 NPFFR1Q9GZQ6 430 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 RANBP3Q9H6Z4 567 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 ESM1Q9NQ30 184 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 TNFRSF19Q9NS68 423 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 TMEM140Q9NV12 185 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 SIGLEC9Q9Y336 463 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 MMP24Q9Y5R2 645 aa8.91□□□□□ -0.98
TRAPPC8-204ENST00000578252 CHST1O43916 411 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 SNAPC5O75971 98 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 KBTBD11O94819 623 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 IGKV1-5P01602 117 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 HLA-DRB1P01911 266 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 CRYGBP07316 175 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 CNTFRP26992 372 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 MAS1LP35410 378 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 G6PCP35575 357 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 FBLN7Q53RD9 439 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 LIN54Q6MZP7 749 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 SSX9Q7RTT3 188 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 MMD2Q8IY49 270 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 VKORC1L1Q8N0U8 176 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 SPIN2AQ99865 258 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 SPIN2BQ9BPZ2 258 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 FBXL15Q9H469 300 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 FKBP11Q9NYL4 201 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 CACFD1Q9UGQ2 172 aa8.9□□□□□ -0.98
TRAPPC8-204ENST00000578252 DBX1A6NMT0 343 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 UPK2O00526 184 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 KCNAB3O43448 404 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 SSNA1O43805 119 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 EIF4EBP3O60516 100 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 ACTL6BO94805 426 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 CRYBA1P05813 215 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 IL6RP08887 468 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 P0C879 139 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 SLC25A6P12236 298 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 RPL8P62917 257 aaKnown RBP8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 PRSS8Q16651 343 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 NMSQ5H8A3 153 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 LYZL2Q7Z4W2 148 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 FOXRED2Q8IWF2 684 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 DUX5Q96PT3 197 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 CITED4Q96RK1 184 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 PRSS22Q9GZN4 317 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 OR51J1Q9H342 316 aa8.89□□□□□ -0.99
TRAPPC8-204ENST00000578252 COA4Q9NYJ1 87 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms