RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 OR2B8PP59922 312 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 IL15RAQ13261 267 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 RTL8BQ17RB0 113 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 THOC7Q6I9Y2 204 aaKnown RBP8.09□□□□□ -1.11
CRLF3-202ENST00000577725 FAM71F2Q6NXP2 309 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 TCTEX1D1Q8N7M0 179 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 OR4D5Q8NGN0 318 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 OR1S1Q8NH92 325 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 LSM10Q969L4 123 aaKnown RBP8.09□□□□□ -1.11
CRLF3-202ENST00000577725 RRNAD1Q96FB5 475 aaKnown RBP8.09□□□□□ -1.11
CRLF3-202ENST00000577725 RITA1Q96K30 269 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 NMES1Q9C002 83 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 MAGT1Q9H0U3 335 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 C7orf69Q9H7B7 122 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 MBD2Q9UBB5 411 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 RCL1Q9Y2P8 373 aaKnown RBP8.09□□□□□ -1.11
CRLF3-202ENST00000577725 AUP1Q9Y679 476 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 TET2Q6N021 2002 aaPredicted RBP8.08□□□□□ -1.12
CRLF3-202ENST00000577725 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
CRLF3-202ENST00000577725 TRIM77I1YAP6 450 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 TIMM23O14925 209 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 NPFFO15130 113 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 SHOXO15266 292 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 RBFOX2O43251 390 aaKnown RBP eCLIP8.08□□□□□ -1.12
CRLF3-202ENST00000577725 MPC2O95563 127 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 TGFAP01135 160 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 MBPP02686 304 aaPredicted RBP8.08□□□□□ -1.12
CRLF3-202ENST00000577725 MYOD1P15172 320 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 CD24P25063 80 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 CNTFRP26992 372 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 UBE2E1P51965 193 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 LGALS4P56470 323 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 ERVK-16P61578 105 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 RPS16P62249 146 aaKnown RBP8.08□□□□□ -1.12
CRLF3-202ENST00000577725 SMCO1Q147U7 214 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 SSX2Q16385 188 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 SPINK9Q5DT21 86 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 CXorf66Q5JRM2 361 aaPredicted RBP8.08□□□□□ -1.12
CRLF3-202ENST00000577725 BRD3OSQ6XYD6 125 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 H2BFWTQ7Z2G1 175 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 DMBX1Q8NFW5 382 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 OR5AN1Q8NGI8 311 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 CD300LFQ8TDQ1 290 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 AJUBAQ96IF1 538 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 SPIN2AQ99865 258 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 SPIN2BQ9BPZ2 258 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 PLEKHA2Q9HB19 425 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 FAM212BQ9NTI7 297 aaPredicted RBP8.08□□□□□ -1.12
CRLF3-202ENST00000577725 TMEM140Q9NV12 185 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 OR5AC2Q9NZP5 309 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 COMMD9Q9P000 198 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 WASHC3Q9Y3C0 194 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 MMP24Q9Y5R2 645 aa8.08□□□□□ -1.12
CRLF3-202ENST00000577725 IGHV1-69DA0A0B4J2H0 117 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 A0A1B0GU03 582 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 MARCH11A6NNE9 402 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 K7EPK0 472 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 IGHV1-69P01742 117 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 SAA1P0DJI8 122 aaPredicted RBP8.07□□□□□ -1.12
CRLF3-202ENST00000577725 NQO2P16083 231 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 PSMB6P28072 239 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 SAA4P35542 130 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 CEACAM3P40198 252 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 POLR2GP62487 172 aaKnown RBP eCLIP8.07□□□□□ -1.12
CRLF3-202ENST00000577725 CYCSP99999 105 aaKnown RBP8.07□□□□□ -1.12
CRLF3-202ENST00000577725 KLF17Q5JT82 389 aaPredicted RBP8.07□□□□□ -1.12
CRLF3-202ENST00000577725 MINOS1Q5TGZ0 78 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 FAM71E2Q8N5Q1 922 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 HARBI1Q96MB7 349 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 RNF126Q9BV68 326 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 QTRT1Q9BXR0 403 aaKnown RBP8.07□□□□□ -1.12
CRLF3-202ENST00000577725 PLSCR3Q9NRY6 295 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 MINOS1-NBL1R4GNA1 71 aa8.07□□□□□ -1.12
CRLF3-202ENST00000577725 TNCP24821 2201 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 TMEM238LA0A1B0GVL6 79 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 SSSCA1O60232 199 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 PITX3O75364 302 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 ATG12O94817 140 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 IGLV2-23P01705 113 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 RRASP10301 218 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 IAPPP10997 89 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 NKX2-1P43699 371 aaPredicted RBP8.06□□□□□ -1.12
CRLF3-202ENST00000577725 HNF4GQ14541 408 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 TMEM177Q53S58 311 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 LAMTOR1Q6IAA8 161 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 DHRS7BQ6IAN0 325 aaPredicted RBP8.06□□□□□ -1.12
CRLF3-202ENST00000577725 OR4A47Q6IF82 309 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 PDPNQ86YL7 162 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 ZNF418Q8TF45 676 aaPredicted RBP8.06□□□□□ -1.12
CRLF3-202ENST00000577725 ASB13Q8WXK3 278 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 CFHR4Q92496 578 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 DCUN1D4Q92564 292 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 FLYWCH2Q96CP2 140 aaKnown RBP8.06□□□□□ -1.12
CRLF3-202ENST00000577725 TPSG1Q9NRR2 321 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 TBL2Q9Y4P3 447 aaKnown RBP8.06□□□□□ -1.12
CRLF3-202ENST00000577725 POMT1Q9Y6A1 747 aa8.06□□□□□ -1.12
CRLF3-202ENST00000577725 PLXNB1O43157 2135 aa8.05□□□□□ -1.12
CRLF3-202ENST00000577725 A0A0U1RQK1 487 aa8.05□□□□□ -1.12
CRLF3-202ENST00000577725 ARPC5O15511 151 aa8.05□□□□□ -1.12
CRLF3-202ENST00000577725 ST8SIA3O43173 380 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms