RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TNFSF13O75888 250 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 GABARAPO95166 117 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 NCR2O95944 276 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 IGLV2-8P01709 118 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 RBMXP38159 391 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 LINC00313P59037 77 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 LDLRAD2Q5SZI1 272 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 AMMECR1LQ6DCA0 310 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 EBLN2Q6P2I7 272 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 H1FOOQ8IZA3 346 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF709Q8N972 641 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 OR4S1Q8NGB4 309 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 OR5H2Q8NGV7 314 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 RPS4Y2Q8TD47 263 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 ITLN1Q8WWA0 313 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 TOMM6Q96B49 74 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 DERL3Q96Q80 235 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 AICDAQ9GZX7 198 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 PLEKHF2Q9H8W4 249 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 RNF122Q9H9V4 155 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 SCN3BQ9NY72 215 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 CTSZQ9UBR2 303 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 NAV1Q8NEY1 1877 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 TMEM2Q9UHN6 1383 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 XIRP1Q702N8 1843 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 LRRK1Q38SD2 2015 aa3.71□□□□□ -1.81
TOPBP1-210ENST00000572787 KMT2EQ8IZD2 1858 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 ARAP3Q8WWN8 1544 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 IGHV1-45A0A0A0MS14 117 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 IGHV3-35A0A0C4DH35 117 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 IZUMO1RA6ND01 250 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 TLCD2A6NGC4 264 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 A8MUN3 132 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 GABARAPH6UMI1 98 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 UBE2L6O14933 153 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 CD5LO43866 347 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 PPP1R3DO95685 299 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 LTAP01374 205 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 HIST1H1BP16401 226 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 CDK6Q00534 326 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 VMA21Q3ZAQ7 101 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 HES3Q5TGS1 186 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 C9orf57Q5W0N0 161 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 Q5XG85 94 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 GLIPR1L1Q6UWM5 242 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF497Q6ZNH5 498 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF627Q7L945 461 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 MARCH3Q86UD3 253 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 MMGT1Q8N4V1 131 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 OR51A4Q8NGJ6 313 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 OR5H6Q8NGV6 325 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 TMEM190Q8WZ59 177 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 MAGOHBQ96A72 148 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 CARD19Q96LW7 228 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 GPX7Q96SL4 187 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 MGLLQ99685 303 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 NRTNQ99748 197 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 TM2D3Q9BRN9 247 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 NKX6-2Q9C056 277 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 PYGO1Q9Y3Y4 419 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 CAMSAP2Q08AD1 1489 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 GRIN2AQ12879 1464 aa3.71□□□□□ -1.82
TOPBP1-210ENST00000572787 THSD7BQ9C0I4 1608 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 SETD1AO15047 1707 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 IGKV6D-21A0A0A0MT36 114 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 GGT3PA6NGU5 568 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 TMEM212A6NML5 194 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 PMS2P5A8MQ11 134 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 GGTLC3B5MD39 225 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 CCL25O15444 150 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 HLA-DQB1P01920 261 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 TRGC2P03986 189 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 PAEPP09466 180 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 FKBP2P26885 142 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 CASP1P29466 404 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 ACVRL1P37023 503 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 GUCA1AP43080 201 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 CXCL6P80162 114 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 KIAA0040Q15053 153 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 MSMO1Q15800 293 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 HSD17B12Q53GQ0 312 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 NCMAPQ5T1S8 102 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 GUSBP11Q6P575 273 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 SGMS2Q8NHU3 365 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 PPTC7Q8NI37 304 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 FAM57AQ8TBR7 257 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 C7orf33Q8WU49 177 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 LYZL4Q96KX0 146 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 TEX37Q96LM6 180 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF492Q9P255 531 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 CKLFQ9UBR5 152 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 BOKQ9UMX3 212 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 SOX21Q9Y651 276 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 COL5A2P05997 1499 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 ABCC10Q5T3U5 1492 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 BAZ1BQ9UIG0 1483 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 POLR2AP24928 1970 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 C2orf16Q68DN1 1984 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms