RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 MUC7Q8TAX7 377 aa7.45□□□□□ -1.22
CIITA-207ENST00000571545 TMEM167AQ8TBQ9 72 aa7.45□□□□□ -1.22
CIITA-207ENST00000571545 IFT46Q9NQC8 304 aa7.45□□□□□ -1.22
CIITA-207ENST00000571545 ELF5Q9UKW6 265 aaPredicted RBP7.45□□□□□ -1.22
CIITA-207ENST00000571545 TRAV18A0A075B6X5 111 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 TRIM64CA6NLI5 447 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 J3QRK9 145 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 PPYP01298 95 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 APELAP0DMC3 54 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 FCGR2CP31995 323 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 TAS2R31P59538 309 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 RPL8P62917 257 aaKnown RBP7.44□□□□□ -1.22
CIITA-207ENST00000571545 MXD1Q05195 221 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 NEDD8Q15843 81 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 MRGPRG-AS1Q2M3A8 158 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 C15orf32Q32M92 178 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 OR2B11Q5JQS5 317 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 PUSL1Q8N0Z8 303 aaKnown RBP7.44□□□□□ -1.22
CIITA-207ENST00000571545 MFSD4AQ8N468 514 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 DYNLRB2Q8TF09 96 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 SECTM1Q8WVN6 248 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 ISOC1Q96CN7 298 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 SLC25A38Q96DW6 304 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 SRSF8Q9BRL6 282 aaKnown RBP7.44□□□□□ -1.22
CIITA-207ENST00000571545 PALMDQ9NP74 551 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 AKIP1Q9NQ31 210 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 SLC2A9Q9NRM0 540 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 BET1LQ9NYM9 111 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 TAS2R8Q9NYW2 309 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 THYN1Q9P016 225 aa7.44□□□□□ -1.22
CIITA-207ENST00000571545 IGKV1D-13A0A0B4J2D9 117 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 LGALS9O00182 355 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 SSX5O60225 188 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 GGCTO75223 188 aaKnown RBP7.43□□□□□ -1.22
CIITA-207ENST00000571545 HPRT1P00492 218 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 IGLV2-14P01704 120 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 ZNF735P0CB33 412 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 IGKV1-13P0DP09 117 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 DEFA4P12838 97 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 S100GP29377 79 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 TAS2R46P59540 309 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 HERV-K104P61576 105 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 ERVK-16P61578 105 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 EIF4EBP1Q13541 118 aaPredicted RBP7.43□□□□□ -1.22
CIITA-207ENST00000571545 UBE2NLQ5JXB2 153 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 HSD17B13Q7Z5P4 300 aaPredicted RBP7.43□□□□□ -1.22
CIITA-207ENST00000571545 SPAG16Q8N0X2 631 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 OR5AP2Q8NGF4 316 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 GIMAP1Q8WWP7 306 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 EEF1AKMT3Q96AZ1 226 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 S100A16Q96FQ6 103 aaKnown RBP7.43□□□□□ -1.22
CIITA-207ENST00000571545 CXorf58Q96LI9 332 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 CITED4Q96RK1 184 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 TM2D3Q9BRN9 247 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 SLC5A7Q9GZV3 580 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 AUNIPQ9H7T9 357 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 TUBA4BQ9H853 241 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 HRASLSQ9HDD0 168 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 C19orf73Q9NVV2 129 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 SLC2A8Q9NY64 477 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 TECRQ9NZ01 308 aaKnown RBP7.43□□□□□ -1.22
CIITA-207ENST00000571545 COMMD9Q9P000 198 aa7.43□□□□□ -1.22
CIITA-207ENST00000571545 TRBV7-1A0A0A6YYK4 115 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 TEX22C9J3V5 150 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 BMPR1BO00238 502 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 XRCC3O43542 346 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 OR2J3O76001 311 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 TNFAIP8O95379 198 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 TRBV12-3P01733 135 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 IFNA6P05013 189 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 CRYGCP07315 174 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 CSN3P07498 182 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 LYL1P12980 280 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 NQO2P16083 231 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 HLA-GP17693 338 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 PSMB6P28072 239 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 RPL30P62888 115 aaKnown RBP7.42□□□□□ -1.22
CIITA-207ENST00000571545 DEFA5Q01523 94 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 FAM106AQ4KMX7 169 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 C10orf55Q5SWW7 151 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 OR4A47Q6IF82 309 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 IL34Q6ZMJ4 242 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 HAPLN4Q86UW8 402 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 CMTM1Q8IZ96 169 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 VKORC1L1Q8N0U8 176 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 Q8N1Y9 231 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 FYTTD1Q96QD9 318 aaKnown RBP7.42□□□□□ -1.22
CIITA-207ENST00000571545 COMMD5Q9GZQ3 224 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 PLEKHA2Q9HB19 425 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 FBXL7Q9UJT9 491 aa7.42□□□□□ -1.22
CIITA-207ENST00000571545 A0A087WXM4 84 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 TPPPO94811 219 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 ARL3P36405 182 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 FXYD4P59646 89 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 ZNF45Q02386 682 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 POU2AF1Q16633 256 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 KLK9Q2XQG4 91 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 TMEM69Q5SWH9 247 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 AADACL3Q5VUY0 350 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms