RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 LY86O95711 162 aa18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 SAA1P0DJI8 122 aaPredicted RBP18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 MC5RP33032 325 aa18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 RAB13P51153 203 aa18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 OR4C13Q8NGP0 309 aa18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 FLYWCH2Q96CP2 140 aaKnown RBP18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 UNKLQ9H9P5 680 aaKnown RBP18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 SIRT7Q9NRC8 400 aa18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 TCF19Q9Y242 345 aa18.24■□□□□ 0.51
VCPKMT-205ENST00000569518 VDAC2P45880 294 aaPredicted RBP18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 SULT1A2P50226 295 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 SP5Q6BEB4 398 aaPredicted RBP18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 HSD17B11Q8NBQ5 300 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 REG4Q9BYZ8 158 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 SH3BGRL3Q9H299 93 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 STRAPQ9Y3F4 350 aaKnown RBP18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 A1L4Q6 167 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 PMS2P5A8MQ11 134 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 DFFBO76075 338 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 HBG1P69891 147 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 HBG2P69892 147 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 NUP50Q9UKX7 468 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 PRNDQ9UKY0 176 aa18.23■□□□□ 0.51
VCPKMT-205ENST00000569518 ODF3BA8MYP8 253 aa18.22■□□□□ 0.51
VCPKMT-205ENST00000569518 HSPE1P61604 102 aaKnown RBP18.22■□□□□ 0.51
VCPKMT-205ENST00000569518 LDLRAD2Q5SZI1 272 aa18.22■□□□□ 0.51
VCPKMT-205ENST00000569518 KPTNQ9Y664 436 aa18.22■□□□□ 0.51
VCPKMT-205ENST00000569518 IGHV1-3A0A0C4DH29 117 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 IGHV2-70DA0A0C4DH43 119 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 MFSD2BA6NFX1 497 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 IGLV2-23P01705 113 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 LCN2P80188 198 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 C10orf105Q8TEF2 133 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 ZNF257Q9Y2Q1 563 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 TNCP24821 2201 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 ANKRD34BA5PLL1 514 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 C15orf62A8K5M9 175 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 VWC2LB2RUY7 222 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 KBTBD11O94819 623 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 ATP6V0CP27449 155 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 FAM168AQ92567 244 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 SAT2Q96F10 170 aaPredicted RBP18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 TSNAXQ99598 290 aaKnown RBP18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 MS4A7Q9GZW8 240 aaPredicted RBP18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 SIRPDQ9H106 197 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 PFDN2Q9UHV9 154 aa18.21■□□□□ 0.51
VCPKMT-205ENST00000569518 NDUFS8O00217 210 aa18.2■□□□□ 0.5
VCPKMT-205ENST00000569518 ATP5J2P56134 94 aa18.2■□□□□ 0.5
VCPKMT-205ENST00000569518 SLC38A11Q08AI6 406 aa18.2■□□□□ 0.5
VCPKMT-205ENST00000569518 KLRD1Q13241 179 aa18.2■□□□□ 0.5
VCPKMT-205ENST00000569518 PIMREGQ9BSJ6 248 aa18.2■□□□□ 0.5
VCPKMT-205ENST00000569518 OR51B2Q9Y5P1 312 aa18.2■□□□□ 0.5
VCPKMT-205ENST00000569518 SPG11Q96JI7 2443 aa18.2■□□□□ 0.5
VCPKMT-205ENST00000569518 ZNF705EA8MWA4 302 aaPredicted RBP18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 PAX1P15863 534 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 VMO1Q7Z5L0 202 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 RPEQ96AT9 228 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 MMP26Q9NRE1 261 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 ASH1LQ9NR48 2969 aaKnown RBP18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 A0A1W2PPI3 338 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 TEX46H3BTG2 121 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 FGF2P09038 288 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 MYOD1P15172 320 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 RPS16P62249 146 aaKnown RBP18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 TPTE2P1Q5T6R2 138 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 OR8G2PQ6IF36 304 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 OR4A5Q8NH83 315 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 TMEM167AQ8TBQ9 72 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 RITA1Q96K30 269 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 POLR3KQ9Y2Y1 108 aaPredicted RBP18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 INSIG2Q9Y5U4 225 aa18.19■□□□□ 0.5
VCPKMT-205ENST00000569518 IGHV3-72A0A0B4J1Y9 119 aa18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 HTR1DP28221 377 aa18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 LILRB2Q8N423 598 aa18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 VSTM2AQ8TAG5 236 aa18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 NRGNQ92686 78 aa18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 GNPNAT1Q96EK6 184 aaPredicted RBP18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 CLCC1Q96S66 551 aa18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 PARD6GQ9BYG4 376 aaPredicted RBP18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 HIPK2Q9H2X6 1198 aa18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 HEYLQ9NQ87 328 aaPredicted RBP18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 CRYBG3Q68DQ2 2970 aa18.18■□□□□ 0.5
VCPKMT-205ENST00000569518 USF1P22415 310 aaPredicted RBP18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 LGALS7P47929 136 aa18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 HOXA1P49639 335 aaPredicted RBP18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 PRCDQ00LT1 54 aa18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 AANATQ16613 207 aa18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 MED13LQ71F56 2210 aa18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 FKBP11Q9NYL4 201 aa18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 DPM3Q9P2X0 92 aa18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 RFNGQ9Y644 331 aa18.17■□□□□ 0.5
VCPKMT-205ENST00000569518 FOXH1O75593 365 aa18.16■□□□□ 0.5
VCPKMT-205ENST00000569518 IFNA5P01569 189 aa18.16■□□□□ 0.5
VCPKMT-205ENST00000569518 HOXB4P17483 251 aaPredicted RBP18.16■□□□□ 0.5
VCPKMT-205ENST00000569518 RUNX1Q01196 453 aa18.16■□□□□ 0.5
VCPKMT-205ENST00000569518 CLEC2AQ6UVW9 174 aa18.16■□□□□ 0.5
VCPKMT-205ENST00000569518 HSD17B13Q7Z5P4 300 aaPredicted RBP18.16■□□□□ 0.5
VCPKMT-205ENST00000569518 MOB3BQ86TA1 216 aa18.16■□□□□ 0.5
VCPKMT-205ENST00000569518 EIF4E3Q8N5X7 224 aaKnown RBP18.16■□□□□ 0.5
VCPKMT-205ENST00000569518 OR5B3Q8NH48 314 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms