RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 TSC22D3Q99576 134 aa7.21□□□□□ -1.26
CHD9-219ENST00000569225 HSPB9Q9BQS6 159 aa7.21□□□□□ -1.26
CHD9-219ENST00000569225 BET1LQ9NYM9 111 aa7.21□□□□□ -1.26
CHD9-219ENST00000569225 FCN1O00602 326 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 KRASP01116 189 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 FGF2P09038 288 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 UCP1P25874 307 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 TMEM267Q0VDI3 215 aaPredicted RBP7.2□□□□□ -1.26
CHD9-219ENST00000569225 FXYD3Q14802 87 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 ZNF585BQ52M93 769 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 TMEM128Q5BJH2 165 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 OR4A47Q6IF82 309 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 PUSL1Q8N0Z8 303 aaKnown RBP7.2□□□□□ -1.26
CHD9-219ENST00000569225 STPG2Q8N412 459 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 ADAD2Q8NCV1 583 aaKnown RBP7.2□□□□□ -1.26
CHD9-219ENST00000569225 SPATA3Q8NHX4 192 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 TP53RKQ96S44 253 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 ZNF747Q9BV97 191 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 WNT10AQ9GZT5 417 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 TMEM222Q9H0R3 208 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 ZNF430Q9H8G1 570 aaPredicted RBP7.2□□□□□ -1.26
CHD9-219ENST00000569225 TPSG1Q9NRR2 321 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 TMEM140Q9NV12 185 aa7.2□□□□□ -1.26
CHD9-219ENST00000569225 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
CHD9-219ENST00000569225 FAM240BA0A1B0GVZ2 78 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 PSMB11A5LHX3 300 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 SNAPC5O75971 98 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 OR5AC1P0C628 307 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 SLC6A1P30531 599 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 BTCP35070 178 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 AKR1C2P52895 323 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 RPL8P62917 257 aaKnown RBP7.19□□□□□ -1.26
CHD9-219ENST00000569225 TNXAQ16473 311 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 SP6Q3SY56 376 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 SHISA2Q6UWI4 295 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 H2BFWTQ7Z2G1 175 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 COMMD1Q8N668 190 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 OR4X2Q8NGF9 303 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 RNASE11Q8TAA1 199 aaKnown RBP7.19□□□□□ -1.26
CHD9-219ENST00000569225 GRPEL2Q8TAA5 225 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 RRNAD1Q96FB5 475 aaKnown RBP7.19□□□□□ -1.26
CHD9-219ENST00000569225 GALNT14Q96FL9 552 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 TRAV41A0A0B4J266 112 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 LINC01548A6NM66 108 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 UPK2O00526 184 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 ATP6V0E1O15342 81 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 HLA-GP17693 338 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 VAMP1P23763 118 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 G6PCP35575 357 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 PJVKQ0ZLH3 352 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 SLC25A42Q86VD7 318 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 ZNF695Q8IW36 515 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 OR5AU1Q8NGC0 362 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 SGMS2Q8NHU3 365 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 ENKURQ8TC29 256 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 IL22RA2Q969J5 263 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 TMEM230Q96A57 120 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 TMEM68Q96MH6 324 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 NOL4LQ96MY1 436 aaPredicted RBP7.19□□□□□ -1.26
CHD9-219ENST00000569225 PHB2Q99623 299 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 SPIN2AQ99865 258 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 SPIN2BQ9BPZ2 258 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 COMMD5Q9GZQ3 224 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 FKBP11Q9NYL4 201 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 PRNDQ9UKY0 176 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 TBC1D24Q9ULP9 559 aa7.19□□□□□ -1.26
CHD9-219ENST00000569225 ARPC1BO15143 372 aaKnown RBP7.18□□□□□ -1.26
CHD9-219ENST00000569225 FBXO24O75426 580 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 CDS2O95674 445 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 CRIP2P52943 208 aaPredicted RBP7.18□□□□□ -1.26
CHD9-219ENST00000569225 RAB25P57735 213 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 NDPQ00604 133 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 ECSCRQ19T08 205 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 TEX38Q6PEX7 206 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 FAM219AQ8IW50 185 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 LGI3Q8N145 548 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 OR4A16Q8NH70 328 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 GLYATL2Q8WU03 294 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 RBPMSQ93062 196 aaKnown RBP7.18□□□□□ -1.26
CHD9-219ENST00000569225 SEC22AQ96IW7 307 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 TMEM56Q96MV1 263 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 C20orf85Q9H1P6 137 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 LINC00527Q9UJ94 153 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 WSB1Q9Y6I7 421 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 TMEM56-RWDD3S4R434 201 aa7.18□□□□□ -1.26
CHD9-219ENST00000569225 RBMXL2O75526 392 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 IGKV1-39P01597 117 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 IGKV1D-39P04432 117 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 TCRBP04435 133 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 RPL27AP46776 148 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 TMEM187Q14656 261 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 AKIRIN2Q53H80 203 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 TMEM268Q5VZI3 342 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 THOC7Q6I9Y2 204 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 UNQ5815/PRO19632Q6UWF5 114 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 SRSF12Q8WXF0 261 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 PALMDQ9NP74 551 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 NUDT15Q9NV35 164 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 FOXA2Q9Y261 457 aaPredicted RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 NUBP2Q9Y5Y2 271 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms