RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TMEM33P57088 247 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 OR2B8PP59922 312 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 MRPS11P82912 194 aaKnown RBP4.64□□□□□ -1.67
SF3B3-210ENST00000567654 EWSR1Q01844 656 aaKnown RBP eCLIP4.64□□□□□ -1.67
SF3B3-210ENST00000567654 ARL16Q0P5N6 197 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM267Q0VDI3 215 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-210ENST00000567654 ESCO2Q56NI9 601 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 SPINK9Q5DT21 86 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 CLLU1Q5K131 121 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 LDLRAD2Q5SZI1 272 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 WDR25Q64LD2 544 aaPredicted RBP4.64□□□□□ -1.67
SF3B3-210ENST00000567654 THOC7Q6I9Y2 204 aaKnown RBP4.64□□□□□ -1.67
SF3B3-210ENST00000567654 ZNF833PQ6ZTB9 187 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 Q8N7P7 452 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 RNASE11Q8TAA1 199 aaKnown RBP4.64□□□□□ -1.67
SF3B3-210ENST00000567654 STOML3Q8TAV4 291 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 ZNF596Q8TC21 504 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 SCARB1Q8WTV0 552 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 NRGNQ92686 78 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 R3HDM4Q96D70 268 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 HSD17B10Q99714 261 aaKnown RBP4.64□□□□□ -1.67
SF3B3-210ENST00000567654 SPIN2AQ99865 258 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 SPIN2BQ9BPZ2 258 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 AIFM2Q9BRQ8 373 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 MRPL20Q9BYC9 149 aaKnown RBP4.64□□□□□ -1.67
SF3B3-210ENST00000567654 GAL3ST2Q9H3Q3 398 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 RBKSQ9H477 322 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 GAB2Q9UQC2 676 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 MMP24Q9Y5R2 645 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 AUP1Q9Y679 476 aa4.64□□□□□ -1.67
SF3B3-210ENST00000567654 A0A087X0M5 115 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 A0A1B0GX30 115 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 LINC00862A6NCI5 91 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 LEUTXA8MZ59 168 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 VWC2LB2RUY7 222 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 J3QR06 171 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 OVOL3O00110 214 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 WRBO00258 174 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 RAB29O14966 203 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 NDUFA2O43678 99 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 CST7O76096 145 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 CRYZL1O95825 349 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 IFNA7P01567 189 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 IGHV4-39P01824 125 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 SLC25A6P12236 298 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 C4BPBP20851 252 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 REG1BP48304 166 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 THBS3P49746 956 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 RAB7AP51149 207 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 DYNLT3P51808 116 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 RPS16P62249 146 aaKnown RBP4.63□□□□□ -1.67
SF3B3-210ENST00000567654 KLRD1Q13241 179 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 SP5Q6BEB4 398 aaPredicted RBP4.63□□□□□ -1.67
SF3B3-210ENST00000567654 SSX9Q7RTT3 188 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 LINC00311Q8N616 119 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 OR2C3Q8N628 320 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM252Q8N6L7 170 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 ZNF525Q8N782 197 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.63□□□□□ -1.67
SF3B3-210ENST00000567654 LY6G5BQ8NDX9 201 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 OR10A7Q8NGE5 316 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 C8orf46Q8TAG6 207 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 TMED6Q8WW62 240 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 ST6GALNAC6Q969X2 333 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 QTRT1Q9BXR0 403 aaKnown RBP4.63□□□□□ -1.67
SF3B3-210ENST00000567654 REG4Q9BYZ8 158 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 SH3BGRL3Q9H299 93 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 CHODLQ9H9P2 273 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 PLEKHA2Q9HB19 425 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 PATZ1Q9HBE1 687 aaKnown RBP4.63□□□□□ -1.67
SF3B3-210ENST00000567654 FAM212BQ9NTI7 297 aaPredicted RBP4.63□□□□□ -1.67
SF3B3-210ENST00000567654 LYRM2Q9NU23 88 aaPredicted RBP4.63□□□□□ -1.67
SF3B3-210ENST00000567654 LPAR3Q9UBY5 353 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 CELSR1Q9NYQ6 3014 aa4.63□□□□□ -1.67
SF3B3-210ENST00000567654 EPG5Q9HCE0 2579 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 DOPEY2Q9Y3R5 2298 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 IGHV2-26A0A0B4J1V2 119 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 PPIAL4CA0A0B4J2A2 164 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 A1L4Q6 167 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 SRRM4A7MD48 611 aaKnown RBP4.62□□□□□ -1.67
SF3B3-210ENST00000567654 PMS2P5A8MQ11 134 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 TOR1AO14656 332 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 TXNL1O43396 289 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 SYNGR2O43760 224 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 SNAPC5O75971 98 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 HPRT1P00492 218 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 IGKV1-16P04430 117 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 FAM157CP0CG43 387 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 PPIAL4GP0DN37 164 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 TPT1P13693 172 aaKnown RBP4.62□□□□□ -1.67
SF3B3-210ENST00000567654 COX7A1P24310 79 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 PAX6P26367 422 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 NUP62P37198 522 aaPredicted RBP4.62□□□□□ -1.67
SF3B3-210ENST00000567654 GPR6P46095 362 aaPredicted RBP4.62□□□□□ -1.67
SF3B3-210ENST00000567654 CAV2P51636 162 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 ZNF137PP52743 207 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 GNB2P62879 340 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 VAMP2P63027 116 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 TLE4Q04727 773 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 TNFRSF9Q07011 255 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms