RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SIGLEC16A6NMB1 481 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 COPEO14579 308 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 TRAPPC3O43617 180 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 SSNA1O43805 119 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 IGKV1-17P01599 117 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 APOEP02649 317 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 C8orf88P0DMB2 117 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 RNASE2P10153 161 aaKnown RBP2.67□□□□□ -1.98
CNOT1-209ENST00000566240 NEFHP12036 1026 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 MIPP30301 263 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 KRTAP10-8P60410 259 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 GNGT1P63211 74 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 BASP1P80723 227 aaKnown RBP2.67□□□□□ -1.98
CNOT1-209ENST00000566240 DEFA6Q01524 100 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 TSPAN31Q12999 210 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 DHRS2Q13268 280 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 PDK2Q15119 407 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 C10orf91Q5T1B1 145 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 AMMECR1LQ6DCA0 310 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 LRP11Q86VZ4 500 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 LYPD1Q8N2G4 141 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 OR10D3Q8NH80 312 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 HIST1H2BAQ96A08 127 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 TLCD1Q96CP7 247 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 ACY3Q96HD9 319 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 PACRGQ96M98 296 aaPredicted RBP2.67□□□□□ -1.98
CNOT1-209ENST00000566240 MED18Q9BUE0 208 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 ABCG5Q9H222 651 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 LRRC19Q9H756 370 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 PTPRJQ12913 1337 aa2.67□□□□□ -1.98
CNOT1-209ENST00000566240 hCG_1818297A0A087WSY0 165 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 GGTLC3B5MD39 225 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 H0Y980 276 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 H3BQF6 201 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 APOC4-APOC2K7ER74 178 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 LECT2O14960 151 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 PFDN6O15212 129 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 CST8O60676 142 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 APOC2P02655 101 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 TYMSP04818 313 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 CRYBA1P05813 215 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 OR13C7P0DN81 318 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 OR12D1P0DN82 309 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 CYBAP13498 195 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 HRES1P13985 223 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 KCNE1P15382 129 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 TPI1P60174 286 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 ACTBP60709 375 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 MAGOHP61326 146 aaKnown RBP2.66□□□□□ -1.98
CNOT1-209ENST00000566240 DYNLT1P63172 113 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 ACTG1P63261 375 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 BSPH1Q075Z2 132 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 COQ5Q5HYK3 327 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 EIF4E3Q8N5X7 224 aaKnown RBP2.66□□□□□ -1.98
CNOT1-209ENST00000566240 FAM172AQ8WUF8 416 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 C1orf54Q8WWF1 131 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 OR7D2Q96RA2 312 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 EIF5A2Q9GZV4 153 aaKnown RBP2.66□□□□□ -1.98
CNOT1-209ENST00000566240 OR51B6Q9H340 312 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 FGFR1OP2Q9NVK5 253 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 POLR3HQ9Y535 204 aaPredicted RBP2.66□□□□□ -1.98
CNOT1-209ENST00000566240 OR51B4Q9Y5P0 310 aa2.66□□□□□ -1.98
CNOT1-209ENST00000566240 PLXNA3P51805 1871 aa2.65□□□□□ -1.98
CNOT1-209ENST00000566240 D6RAR5 112 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 DENRO43583 198 aaKnown RBP2.65□□□□□ -1.99
CNOT1-209ENST00000566240 CRTAPO75718 401 aaPredicted RBP2.65□□□□□ -1.99
CNOT1-209ENST00000566240 ATP5G1P05496 136 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 ZNF708P17019 499 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 CXCL2P19875 107 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 CXCL3P19876 107 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 ALDH3A1P30838 453 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 MARCKSL1P49006 195 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 PDGFRLQ15198 375 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 TMED2Q15363 201 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 ZNF141Q15928 474 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 UAP1Q16222 522 aaPredicted RBP2.65□□□□□ -1.99
CNOT1-209ENST00000566240 DEFB115Q30KQ5 88 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 PYCR3Q53H96 274 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 OGFRL1Q5TC84 451 aaPredicted RBP2.65□□□□□ -1.99
CNOT1-209ENST00000566240 CST9Q5W186 159 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 LCN8Q6JVE9 175 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 CCDC121Q6ZUS5 278 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 CDCA4Q9BXL8 241 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 DERL2Q9GZP9 239 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 MED28Q9H204 178 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 WASHC3Q9Y3C0 194 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 HEY1Q9Y5J3 304 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 SEC16AO15027 2179 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 PTPRDP23468 1912 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 NLRC5Q86WI3 1866 aa2.65□□□□□ -1.99
CNOT1-209ENST00000566240 DOCK3Q8IZD9 2030 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 SHROOM3Q8TF72 1996 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 ARL5CA6NH57 179 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 LRRN3E7EW58 273 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 PIRO00625 290 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 SLC25A20O43772 301 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 AHSA1O95433 338 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 CPSF4O95639 269 aaKnown RBP2.64□□□□□ -1.99
CNOT1-209ENST00000566240 OPN1SWP03999 348 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms