RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ECSCRQ19T08 205 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 CXorf66Q5JRM2 361 aaPredicted RBP16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 HIST2H2BDQ6DRA6 164 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 TOMM5Q8N4H5 51 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 OR13C8Q8NGS7 320 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 OR4A5Q8NH83 315 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 ABHD5Q8WTS1 349 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 TMEM68Q96MH6 324 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 SCP2D1Q9UJQ7 156 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 FOXA2Q9Y261 457 aaPredicted RBP16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 S1PR2O95136 353 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 TSPAN15O95858 294 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 CTSDP07339 412 aaPredicted RBP16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 MAS1LP35410 378 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 PIGPP57054 158 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 RPL23AP62750 156 aaKnown RBP16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 GNB1P62873 340 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 ZNF45Q02386 682 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 ZNF585BQ52M93 769 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 OR4F17Q8NGA8 305 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 OR51S1Q8NGJ8 323 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 GRPEL2Q8TAA5 225 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 MYOZ3Q8TDC0 251 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 OR4F4Q96R69 305 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 MPPED1O15442 326 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 ACTL6BO94805 426 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 CNPY1Q3B7I2 92 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 NSUN5P1Q3KNT7 163 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 OR4A47Q6IF82 309 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 TREML4Q6UXN2 200 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 CCDC71LQ8N9Z2 235 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 LFNGQ8NES3 379 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 OR5M8Q8NGP6 311 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 MARCH1Q8TCQ1 289 aa16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 FAM103A1Q9BTL3 118 aaKnown RBP16.48■□□□□ 0.23
SHCBP1-205ENST00000566016 NOTCH3Q9UM47 2321 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 MARCH11A6NNE9 402 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 H0Y980 276 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 B3GALNT1O75752 331 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 IL6RP08887 468 aaPredicted RBP16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 PI3P19957 117 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 TNXAQ16473 311 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 KHDC1LQ5JSQ8 128 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 UNQ5815/PRO19632Q6UWF5 114 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 SRSF12Q8WXF0 261 aaKnown RBP16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 R3HDM4Q96D70 268 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 MCUBQ9NWR8 336 aa16.47■□□□□ 0.23
SHCBP1-205ENST00000566016 A0A1W2PN81 502 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 SOX15O60248 233 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 RPLP1P05386 114 aaKnown RBP16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 CHRNA7P36544 502 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 ERVK-16P61578 105 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 SSX9Q7RTT3 188 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 SPIN2AQ99865 258 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 SPIN2BQ9BPZ2 258 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 HRASLSQ9HDD0 168 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 COPZ2Q9P299 210 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 C14orf166Q9Y224 244 aaKnown RBP16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 NOTCH1P46531 2555 aa16.46■□□□□ 0.23
SHCBP1-205ENST00000566016 RPA2P15927 270 aa16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 LPAR6P43657 344 aa16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 CDX1P47902 265 aaPredicted RBP16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 RPL8P62917 257 aaKnown RBP16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 DMBX1Q8NFW5 382 aa16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 SCGB3A2Q96PL1 93 aa16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 SDHCQ99643 169 aaPredicted RBP16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 TMEM140Q9NV12 185 aa16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 PTTG2Q9NZH5 202 aa16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 GPR132Q9UNW8 380 aa16.45■□□□□ 0.22
SHCBP1-205ENST00000566016 A0A1W2PRX2 142 aa16.44■□□□□ 0.22
SHCBP1-205ENST00000566016 H3BUA1 57 aa16.44■□□□□ 0.22
SHCBP1-205ENST00000566016 BRI3O95415 125 aa16.44■□□□□ 0.22
SHCBP1-205ENST00000566016 TRIQKQ629K1 86 aa16.44■□□□□ 0.22
SHCBP1-205ENST00000566016 TMEM65Q6PI78 240 aa16.44■□□□□ 0.22
SHCBP1-205ENST00000566016 RTBDNQ9BSG5 229 aaPredicted RBP16.44■□□□□ 0.22
SHCBP1-205ENST00000566016 C5orf66Q9H5L9 145 aa16.44■□□□□ 0.22
SHCBP1-205ENST00000566016 SERPINE2P07093 398 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 HLA-GP17693 338 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 CD40LGP29965 261 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 BAK1Q16611 211 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 ASPHD1Q5U4P2 390 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 ZNF695Q8IW36 515 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 UBE2E2Q96LR5 201 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 SLA2Q9H6Q3 261 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 AKIP1Q9NQ31 210 aa16.43■□□□□ 0.22
SHCBP1-205ENST00000566016 C3orf85A0A1B0GTC6 90 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 MSGN1A6NI15 193 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 UPK2O00526 184 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 PF4V1P10720 104 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 RAB9AP51151 201 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 LCNL1Q6ZST4 164 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 TP53RKQ96S44 253 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 PHB2Q99623 299 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 KLK15Q9H2R5 256 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 KRASP01116 189 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 RPL27AP46776 148 aaKnown RBP16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 KIAA0141Q14154 515 aaPredicted RBP16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 C10orf55Q5SWW7 151 aa16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 ZNF57Q68EA5 555 aaPredicted RBP16.42■□□□□ 0.22
SHCBP1-205ENST00000566016 KLHL30-AS1Q8NEE0 82 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms