RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ARSJQ5FYB0 599 aaPredicted RBP20.52■□□□□ 0.88
NME3-208ENST00000565379 HIST2H2BDQ6DRA6 164 aa20.52■□□□□ 0.88
NME3-208ENST00000565379 R3HDM4Q96D70 268 aa20.52■□□□□ 0.88
NME3-208ENST00000565379 ALX4Q9H161 411 aaPredicted RBP20.52■□□□□ 0.88
NME3-208ENST00000565379 C20orf85Q9H1P6 137 aa20.52■□□□□ 0.88
NME3-208ENST00000565379 BET1LQ9NYM9 111 aa20.52■□□□□ 0.88
NME3-208ENST00000565379 NUBP2Q9Y5Y2 271 aa20.52■□□□□ 0.88
NME3-208ENST00000565379 TGP01266 2768 aa20.52■□□□□ 0.88
NME3-208ENST00000565379 FGF2P09038 288 aa20.51■□□□□ 0.87
NME3-208ENST00000565379 OR5AC1P0C628 307 aa20.51■□□□□ 0.87
NME3-208ENST00000565379 C9orf152Q5JTZ5 239 aa20.51■□□□□ 0.87
NME3-208ENST00000565379 ZNF562Q6V9R5 426 aa20.51■□□□□ 0.87
NME3-208ENST00000565379 PUSL1Q8N0Z8 303 aaKnown RBP20.51■□□□□ 0.87
NME3-208ENST00000565379 DMBX1Q8NFW5 382 aa20.51■□□□□ 0.87
NME3-208ENST00000565379 MARCH11A6NNE9 402 aa20.5■□□□□ 0.87
NME3-208ENST00000565379 ARPC1BO15143 372 aaKnown RBP20.5■□□□□ 0.87
NME3-208ENST00000565379 CDS2O95674 445 aa20.5■□□□□ 0.87
NME3-208ENST00000565379 SLC35E3Q7Z769 313 aa20.5■□□□□ 0.87
NME3-208ENST00000565379 DUSP18Q8NEJ0 188 aa20.5■□□□□ 0.87
NME3-208ENST00000565379 TMEM167AQ8TBQ9 72 aa20.5■□□□□ 0.87
NME3-208ENST00000565379 GLYATL2Q8WU03 294 aa20.5■□□□□ 0.87
NME3-208ENST00000565379 IL22RA2Q969J5 263 aa20.5■□□□□ 0.87
NME3-208ENST00000565379 KBTBD11O94819 623 aa20.49■□□□□ 0.87
NME3-208ENST00000565379 VDAC2P45880 294 aaPredicted RBP20.49■□□□□ 0.87
NME3-208ENST00000565379 DCTN2Q13561 401 aaKnown RBP20.49■□□□□ 0.87
NME3-208ENST00000565379 SP6Q3SY56 376 aa20.49■□□□□ 0.87
NME3-208ENST00000565379 FOXRED2Q8IWF2 684 aa20.49■□□□□ 0.87
NME3-208ENST00000565379 MMD2Q8IY49 270 aa20.49■□□□□ 0.87
NME3-208ENST00000565379 TMEM56Q96MV1 263 aa20.49■□□□□ 0.87
NME3-208ENST00000565379 ZNF580Q9UK33 172 aa20.49■□□□□ 0.87
NME3-208ENST00000565379 FLVCR2Q9UPI3 526 aa20.49■□□□□ 0.87
NME3-208ENST00000565379 TMEM56-RWDD3S4R434 201 aa20.49■□□□□ 0.87
NME3-208ENST00000565379 KRASP01116 189 aa20.48■□□□□ 0.87
NME3-208ENST00000565379 MAS1LP35410 378 aa20.48■□□□□ 0.87
NME3-208ENST00000565379 SUPT4H1P63272 117 aaKnown RBP20.48■□□□□ 0.87
NME3-208ENST00000565379 TMEM187Q14656 261 aa20.48■□□□□ 0.87
NME3-208ENST00000565379 PRSS8Q16651 343 aa20.48■□□□□ 0.87
NME3-208ENST00000565379 OR4A47Q6IF82 309 aa20.48■□□□□ 0.87
NME3-208ENST00000565379 VKORC1L1Q8N0U8 176 aa20.48■□□□□ 0.87
NME3-208ENST00000565379 TMEM140Q9NV12 185 aa20.48■□□□□ 0.87
NME3-208ENST00000565379 NUDT15Q9NV35 164 aa20.48■□□□□ 0.87
NME3-208ENST00000565379 IGHV7-81A0A0B4J1V7 117 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 ACTL6BO94805 426 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 SFT2D2O95562 160 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 CA2P00918 260 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 H2AFB2P0C5Z0 115 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 VAMP1P23763 118 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 MECP2P51608 486 aaKnown RBP20.47■□□□□ 0.87
NME3-208ENST00000565379 SSX9Q7RTT3 188 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 ZNF695Q8IW36 515 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 RBPMSQ93062 196 aaKnown RBP20.47■□□□□ 0.87
NME3-208ENST00000565379 SEC22AQ96IW7 307 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 OR51J1Q9H342 316 aa20.47■□□□□ 0.87
NME3-208ENST00000565379 SH2D7A6NKC9 451 aaPredicted RBP20.46■□□□□ 0.87
NME3-208ENST00000565379 AP4M1O00189 453 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 IGKV1-39P01597 117 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 IGKV1D-39P04432 117 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 IL6RP08887 468 aaPredicted RBP20.46■□□□□ 0.87
NME3-208ENST00000565379 OR4E1P0C645 316 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 G6PCP35575 357 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 CX3CL1P78423 397 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 PPP1R1AQ13522 171 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 PLET1Q6UQ28 207 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 Q6ZS46 218 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 H2BFWTQ7Z2G1 175 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 NRARPQ7Z6K4 114 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 FAM219AQ8IW50 185 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 LGI3Q8N145 548 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 CLCC1Q96S66 551 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 HSPB9Q9BQS6 159 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 GON7Q9BXV9 100 aa20.46■□□□□ 0.87
NME3-208ENST00000565379 FCN1O00602 326 aa20.45■□□□□ 0.86
NME3-208ENST00000565379 PTTG1O95997 202 aa20.45■□□□□ 0.86
NME3-208ENST00000565379 IGF1P05019 195 aa20.45■□□□□ 0.86
NME3-208ENST00000565379 RRNAD1Q96FB5 475 aaKnown RBP20.45■□□□□ 0.86
NME3-208ENST00000565379 ZNF430Q9H8G1 570 aaPredicted RBP20.45■□□□□ 0.86
NME3-208ENST00000565379 TPSG1Q9NRR2 321 aa20.45■□□□□ 0.86
NME3-208ENST00000565379 SERTAD4Q9NUC0 356 aa20.45■□□□□ 0.86
NME3-208ENST00000565379 TRAV6A0A075B6T7 132 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 DUXBA0A1W2PPF3 345 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 UPK2O00526 184 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 SNAPC5O75971 98 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 CNIH1O95406 144 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 TSPAN15O95858 294 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 HLA-AP01891 365 aaKnown RBP20.44■□□□□ 0.86
NME3-208ENST00000565379 ANXA7P20073 488 aaKnown RBP20.44■□□□□ 0.86
NME3-208ENST00000565379 AKR1C2P52895 323 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 RAB25P57735 213 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 RPL8P62917 257 aaKnown RBP20.44■□□□□ 0.86
NME3-208ENST00000565379 C4orf46Q504U0 113 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 SELENOHQ8IZQ5 122 aaKnown RBP20.44■□□□□ 0.86
NME3-208ENST00000565379 LRTM2Q8N967 370 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 CHPT1Q8WUD6 406 aa20.44■□□□□ 0.86
NME3-208ENST00000565379 PRKDCP78527 4128 aaKnown RBP20.43■□□□□ 0.86
NME3-208ENST00000565379 C9orf170A2RU37 121 aa20.43■□□□□ 0.86
NME3-208ENST00000565379 CRIP2P52943 208 aaPredicted RBP20.43■□□□□ 0.86
NME3-208ENST00000565379 TMEM267Q0VDI3 215 aaPredicted RBP20.43■□□□□ 0.86
NME3-208ENST00000565379 FXYD3Q14802 87 aa20.43■□□□□ 0.86
NME3-208ENST00000565379 TMEM268Q5VZI3 342 aa20.43■□□□□ 0.86
NME3-208ENST00000565379 LYG2Q86SG7 212 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms