RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 OR2C1O95371 312 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 HLA-AP01891 365 aaKnown RBP6.46□□□□□ -1.38
CAPN3-213ENST00000565173 IGKV1-13P0DP09 117 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 FOLR2P14207 255 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 RAB3BP20337 219 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 FGF9P31371 208 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-213ENST00000565173 CD81P60033 236 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 KLK9Q2XQG4 91 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 C15orf32Q32M92 178 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 TIMM50Q3ZCQ8 353 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 HACD4Q5VWC8 232 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 LAX1Q8IWV1 398 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 MMD2Q8IY49 270 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 KCTD12Q96CX2 325 aaKnown RBP6.46□□□□□ -1.38
CAPN3-213ENST00000565173 YIPF6Q96EC8 236 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 FAM110AQ9BQ89 295 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 DCUN1D5Q9BTE7 237 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 ST6GALNAC5Q9BVH7 336 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 WFDC10AQ9H1F0 79 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 ATG5Q9H1Y0 275 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 DCSTAMPQ9H295 470 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 KLK9Q9UKQ9 250 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 OR2W1Q9Y3N9 320 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 TMEM235A6NFC5 223 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 NPIPB5A8MRT5 1133 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 OR11H12B2RN74 326 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 SSX5O60225 188 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 CREBL2O60519 120 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-213ENST00000565173 GGCTO75223 188 aaKnown RBP6.45□□□□□ -1.38
CAPN3-213ENST00000565173 TUSC2O75896 110 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 SLC22A5O76082 557 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 ACTL6BO94805 426 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 TPPPO94811 219 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 NDUFB8O95169 186 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 CRYGCP07315 174 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 CTXN2P0C2S0 81 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 ZNF735P0CB33 412 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 CBLN1P23435 193 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 LSM3P62310 102 aaKnown RBP6.45□□□□□ -1.38
CAPN3-213ENST00000565173 ARL6IP1Q15041 203 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 OR2B11Q5JQS5 317 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 CNIH2Q6PI25 160 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 KCTD9Q7L273 389 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 SLC25A42Q86VD7 318 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 GPHB5Q86YW7 130 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 PUSL1Q8N0Z8 303 aaKnown RBP6.45□□□□□ -1.38
CAPN3-213ENST00000565173 TMEM167AQ8TBQ9 72 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 WDR89Q96FK6 387 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-213ENST00000565173 CCDC140Q96MF4 163 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 GPHA2Q96T91 129 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 RNF167Q9H6Y7 350 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 SLC2A9Q9NRM0 540 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 SLC2A8Q9NY64 477 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 ZNF257Q9Y2Q1 563 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 PRELID3BQ9Y3B1 194 aa6.45□□□□□ -1.38
CAPN3-213ENST00000565173 KMT2AQ03164 3969 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 CGB1A6NKQ9 187 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 NOTOA8MTQ0 251 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 KBTBD11O94819 623 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 IGHV3-23P01764 117 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 CLEC2LP0C7M8 214 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 AREGP15514 252 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 CTRB1P17538 263 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 SDC2P34741 201 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 MXD1Q05195 221 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 FAM209BQ5JX69 171 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 CTRB2Q6GPI1 263 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 GPR141Q7Z602 305 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 MFSD4AQ8N468 514 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 OR13F1Q8NGS4 319 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 NUDCD2Q8WVJ2 157 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 CACNG8Q8WXS5 425 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 OR2A7Q96R45 310 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 HSD17B10Q99714 261 aaKnown RBP6.44□□□□□ -1.38
CAPN3-213ENST00000565173 FUNDC2Q9BWH2 189 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 TECRQ9NZ01 308 aaKnown RBP6.44□□□□□ -1.38
CAPN3-213ENST00000565173 MLXQ9UH92 298 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 ANXA10Q9UJ72 324 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 FBXL7Q9UJT9 491 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 SPATA2Q9UM82 520 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 MRPS7Q9Y2R9 242 aaKnown RBP6.44□□□□□ -1.38
CAPN3-213ENST00000565173 SELENOKQ9Y6D0 94 aa6.44□□□□□ -1.38
CAPN3-213ENST00000565173 TMEM213A2RRL7 107 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 PTHLHP12272 177 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 MYOD1P15172 320 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 PSMB6P28072 239 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 MAS1LP35410 378 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 TGFBR1P36897 503 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 RPL27AP46776 148 aaKnown RBP6.43□□□□□ -1.38
CAPN3-213ENST00000565173 ALDH3B2P48448 385 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 GUCA2BQ16661 112 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 GPR107Q5VW38 600 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 CLEC19AQ6UXS0 136 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 ZNF66Q6ZN08 573 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 TPRA1Q86W33 373 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 OR4S2Q8NH73 311 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 VSTM2AQ8TAG5 236 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 DYNLRB2Q8TF09 96 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 TCTEX1D2Q8WW35 142 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms