RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 ZNF486Q96H40 463 aaPredicted RBP13.48□□□□□ -0.25
USB1-209ENST00000564387 BET1LQ9NYM9 111 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 A0A1W2PN81 502 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 CNIH1O95406 144 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 NQO2P16083 231 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 S100A5P33763 92 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 MAS1LP35410 378 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 CHRNA7P36544 502 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 RUNX1Q01196 453 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 KHDC1LQ5JSQ8 128 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 POC5Q8NA72 575 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 OR4A5Q8NH83 315 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 GRPEL2Q8TAA5 225 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 P2RX4Q99571 388 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 COMMD9Q9P000 198 aa13.47□□□□□ -0.25
USB1-209ENST00000564387 H3BUA1 57 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 AKAIN1P0CW23 69 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 PF4V1P10720 104 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 MYCNOSP40205 109 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 OR4A47Q6IF82 309 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 TMEM65Q6PI78 240 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 KLHL30-AS1Q8NEE0 82 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 OR6Q1Q8NGQ2 317 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 ABHD5Q8WTS1 349 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 C4orf3Q8WVX3 66 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 SRSF12Q8WXF0 261 aaKnown RBP13.46□□□□□ -0.25
USB1-209ENST00000564387 TRIM63Q969Q1 353 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 THAP7Q9BT49 309 aaPredicted RBP13.46□□□□□ -0.25
USB1-209ENST00000564387 SLA2Q9H6Q3 261 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 SLC2A9Q9NRM0 540 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 SLC2A8Q9NY64 477 aa13.46□□□□□ -0.25
USB1-209ENST00000564387 NOTCH1P46531 2555 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 MSGN1A6NI15 193 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 I3L521 148 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 S1PR2O95136 353 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 S100GP29377 79 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 GNB1P62873 340 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 TNXAQ16473 311 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 PHLDA2Q53GA4 152 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 TBC1D26Q86UD7 250 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 LINC00482Q8N8I6 264 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 OR4C16Q8NGL9 310 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 VSIG4Q9Y279 399 aa13.45□□□□□ -0.26
USB1-209ENST00000564387 MPPED1O15442 326 aa13.44□□□□□ -0.26
USB1-209ENST00000564387 ECI1P42126 302 aa13.44□□□□□ -0.26
USB1-209ENST00000564387 LPAR6P43657 344 aa13.44□□□□□ -0.26
USB1-209ENST00000564387 FHL3Q13643 280 aa13.44□□□□□ -0.26
USB1-209ENST00000564387 SURF2Q15527 256 aaPredicted RBP13.44□□□□□ -0.26
USB1-209ENST00000564387 ZFAND1Q8TCF1 268 aa13.44□□□□□ -0.26
USB1-209ENST00000564387 RAX2Q96IS3 184 aa13.44□□□□□ -0.26
USB1-209ENST00000564387 SPIN2AQ99865 258 aa13.44□□□□□ -0.26
USB1-209ENST00000564387 SPIN2BQ9BPZ2 258 aa13.44□□□□□ -0.26
USB1-209ENST00000564387 A0A1B0GW64 132 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 NUDT19A8MXV4 375 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 DISC1C4P0D8 188 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 TEX22C9J3V5 150 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 E7EUB6 86 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 UPK2O00526 184 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 ACTL6BO94805 426 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 RPL8P62917 257 aaKnown RBP13.43□□□□□ -0.26
USB1-209ENST00000564387 KLK9Q2XQG4 91 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 C10orf55Q5SWW7 151 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 SAMD5Q5TGI4 173 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 FAAP20Q6NZ36 180 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 SSX9Q7RTT3 188 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 MRPL41Q8IXM3 137 aaKnown RBP13.43□□□□□ -0.26
USB1-209ENST00000564387 Q8N402 240 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 ADAD2Q8NCV1 583 aaKnown RBP13.43□□□□□ -0.26
USB1-209ENST00000564387 OR13C8Q8NGS7 320 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 DEDD2Q8WXF8 326 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 GNB4Q9HAV0 340 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 KLK9Q9UKQ9 250 aa13.43□□□□□ -0.26
USB1-209ENST00000564387 A6NHS1 94 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 CGB1A6NKQ9 187 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 MARCH11A6NNE9 402 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 CCL24O00175 119 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 IGKV1-39P01597 117 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 PF4P02776 101 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 IGKV1D-39P04432 117 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 CTSDP07339 412 aaPredicted RBP13.42□□□□□ -0.26
USB1-209ENST00000564387 PGAM2P15259 253 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 CD40LGP29965 261 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 PIGPP57054 158 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 KLF9Q13886 244 aaPredicted RBP13.42□□□□□ -0.26
USB1-209ENST00000564387 SPANXN2Q5MJ10 180 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 KPRPQ5T749 579 aaPredicted RBP13.42□□□□□ -0.26
USB1-209ENST00000564387 TTC9CQ8N5M4 171 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 OR5T1Q8NG75 326 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 PRRT1Q99946 306 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 RTBDNQ9BSG5 229 aaPredicted RBP13.42□□□□□ -0.26
USB1-209ENST00000564387 SRRQ9GZT4 340 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 TMEM140Q9NV12 185 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 GPR132Q9UNW8 380 aa13.42□□□□□ -0.26
USB1-209ENST00000564387 TRAV3A0A0B4J244 114 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 OR9G9P0C7N8 305 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 HLA-GP17693 338 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 PI3P19957 117 aa13.41□□□□□ -0.26
USB1-209ENST00000564387 RPL27AP46776 148 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 1042.7 ms