RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 C3orf85A0A1B0GTC6 90 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 A0A1B0GUS0 222 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 LYRM1O43325 122 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 UPK1BO75841 260 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 KRASP01116 189 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 OPN1MWP04001 364 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 IGF1P05019 195 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 P0C879 139 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 OPN1MW2P0DN77 364 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 OPN1MW3P0DN78 364 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 UCP1P25874 307 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 FAUP35544 74 aaKnown RBP7.67□□□□□ -1.18
CLK3-208ENST00000562626 INPP1P49441 399 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 TAS2R31P59538 309 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 GNB1P62873 340 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 FXYD3Q14802 87 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 ECSCRQ19T08 205 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 VMA21Q3ZAQ7 101 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 C19orf35Q6ZS72 473 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 C18orf65Q6ZTR6 163 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 TMED4Q7Z7H5 227 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 C3orf56Q8N813 242 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 TEX45Q8NA69 505 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 GRPEL2Q8TAA5 225 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 TMEM167AQ8TBQ9 72 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 GLYATL2Q8WU03 294 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 BORCS5Q969J3 196 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 SEC22AQ96IW7 307 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 PLEKHA2Q9HB19 425 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 TMEM140Q9NV12 185 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 COMMD9Q9P000 198 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 C14orf166Q9Y224 244 aaKnown RBP7.67□□□□□ -1.18
CLK3-208ENST00000562626 NSG2Q9Y328 171 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 NUBP2Q9Y5Y2 271 aa7.67□□□□□ -1.18
CLK3-208ENST00000562626 PSMB11A5LHX3 300 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 NAP1L6A6NFF2 107 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 MARCH11A6NNE9 402 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 AP4M1O00189 453 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 UPK2O00526 184 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 KCNAB3O43448 404 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 OR2A4O95047 310 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 NDUFB6O95139 128 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 NQO2P16083 231 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 AKR1C4P17516 323 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 PPIFP30405 207 aaKnown RBP7.66□□□□□ -1.18
CLK3-208ENST00000562626 ECI1P42126 302 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 DEFA5Q01523 94 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 DHODHQ02127 395 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 CBX3Q13185 183 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 TMEM187Q14656 261 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 TNXAQ16473 311 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 ZNF562Q6V9R5 426 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 CCDC71LQ8N9Z2 235 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 POC5Q8NA72 575 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 LFNGQ8NES3 379 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 OR5AU1Q8NGC0 362 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 SRSF12Q8WXF0 261 aaKnown RBP7.66□□□□□ -1.18
CLK3-208ENST00000562626 DEDD2Q8WXF8 326 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 ARPC1AQ92747 370 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 OR2A7Q96R45 310 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 CITED2Q99967 270 aaPredicted RBP7.66□□□□□ -1.18
CLK3-208ENST00000562626 TMEM222Q9H0R3 208 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 KLK15Q9H2R5 256 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 BET1LQ9NYM9 111 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 PKD1L1Q8TDX9 2849 aa7.66□□□□□ -1.18
CLK3-208ENST00000562626 TRAV41A0A0B4J266 112 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 TEX13DA0A0J9YY54 714 aaPredicted RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 HMX3A6NHT5 357 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 TEX22C9J3V5 150 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 RBMXL2O75526 392 aaKnown RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 HRASP01112 189 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 ANXA7P20073 488 aaKnown RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 SLC6A1P30531 599 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 CRIP2P52943 208 aaPredicted RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 OR2B8PP59922 312 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 CD83Q01151 205 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 ASAH1Q13510 395 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 PPP1R1AQ13522 171 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 RBMS2Q15434 407 aaKnown RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 ANKRD55Q3KP44 614 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 Q6ZRM9 215 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 CENPVQ7Z7K6 275 aaPredicted RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 FOXRED2Q8IWF2 684 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 SELENOHQ8IZQ5 122 aaKnown RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 TCTEX1D1Q8N7M0 179 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 DMBX1Q8NFW5 382 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 SGMS2Q8NHU3 365 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 CD300LFQ8TDQ1 290 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 ABHD5Q8WTS1 349 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 C7orf50Q9BRJ6 194 aaKnown RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 FAM212BQ9NTI7 297 aaPredicted RBP7.65□□□□□ -1.18
CLK3-208ENST00000562626 ZNF580Q9UK33 172 aa7.65□□□□□ -1.18
CLK3-208ENST00000562626 TRAV6A0A075B6T7 132 aa7.64□□□□□ -1.19
CLK3-208ENST00000562626 A0A1W2PN81 502 aa7.64□□□□□ -1.19
CLK3-208ENST00000562626 MSGN1A6NI15 193 aa7.64□□□□□ -1.19
CLK3-208ENST00000562626 FBXO24O75426 580 aa7.64□□□□□ -1.19
CLK3-208ENST00000562626 CDS2O95674 445 aa7.64□□□□□ -1.19
CLK3-208ENST00000562626 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
CLK3-208ENST00000562626 RPLP1P05386 114 aaKnown RBP7.64□□□□□ -1.19
CLK3-208ENST00000562626 AREGP15514 252 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms