RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 FUT6P51993 359 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 LGALS4P56470 323 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 GGNQ86UU5 652 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 OR2M7Q8NG81 312 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 OR10D3Q8NH80 312 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 OR2AE1Q8NHA4 323 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 NEUROG1Q92886 237 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 ST6GALNAC6Q969X2 333 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 SPSB1Q96BD6 273 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 BORCS8Q96FH0 119 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 QTRT1Q9BXR0 403 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 SPRY4Q9C004 299 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 SAA2-SAA4A0A096LPE2 208 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 DEGS1O15121 323 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 MT-CO3P00414 261 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 SLC25A6P12236 298 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 SRD5A2P31213 254 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 ARF1P84077 181 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 NABP1Q96AH0 204 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 TMEM204Q9BSN7 226 aa11.77□□□□□ -0.53
GTF3C1-203ENST00000562609 MGAQ8IWI9 3026 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 TRAV9-1A0A075B6T8 112 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 NUDT3O95989 172 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 CTXN2P0C2S0 81 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 B4GALT1P15291 398 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 ARF6P62330 175 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 HTD2P86397 168 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 PSG9Q00887 426 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 Q56UQ5 140 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 OR10J3Q5JRS4 329 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 TMEM108Q6UXF1 575 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 C19orf35Q6ZS72 473 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 SFXN3Q9BWM7 321 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 TNFSF15O95150 251 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 CTSSP25774 331 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 APOBEC3AP31941 199 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 RAC3P60763 192 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 HES3Q5TGS1 186 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 TMEM164Q5U3C3 297 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 ZNF324BQ6AW86 544 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 FAM71F2Q6NXP2 309 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 VWA1Q6PCB0 445 aa11.76□□□□□ -0.53
GTF3C1-203ENST00000562609 SVILO95425 2214 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 NHLH1Q02575 133 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 TFF3Q07654 80 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 GTF3C1Q12789 2109 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 C9orf135Q5VTT2 229 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 TSKUQ8WUA8 353 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 TMEM54Q969K7 222 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 ZC2HC1AQ96GY0 325 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 SF3B5Q9BWJ5 86 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 GNB1LQ9BYB4 327 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 KCNIP2Q9NS61 270 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 SIRPB1O00241 398 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 NEURL1O76050 574 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 CLDN1O95832 211 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 PSG7Q13046 419 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 MMD2Q8IY49 270 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 OR8I2Q8N0Y5 310 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 GJC3Q8NFK1 279 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 OR10P1Q8NGE3 313 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 OR4P4Q8NGL7 312 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 RDH5Q92781 318 aa11.75□□□□□ -0.53
GTF3C1-203ENST00000562609 M0R135 149 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 REG1AP05451 166 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 SRIP30626 198 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 DEFB125Q8N687 156 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 C10orf35Q96D05 121 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 ZNF799Q96GE5 643 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 OR7C2O60412 319 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 TUSC2O75896 110 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 RBM11P57052 281 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 RPS16P62249 146 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 CNN3Q15417 329 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 RPEL1Q2QD12 228 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 BVES-AS1Q5T3Y7 98 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 ABHD17BQ5VST6 288 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 OR1L1Q8NH94 360 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 GVINP1Q7Z2Y8 2422 aa11.74□□□□□ -0.53
GTF3C1-203ENST00000562609 TRBV9A0A0B4J1U6 114 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 SCO2A0A1W2PP80 73 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 RAB29O14966 203 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 CELA3BP08861 270 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 S100GP29377 79 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 C10orf128Q5T292 105 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 AAED1Q7RTV5 226 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 FGFBP3Q8TAT2 258 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 TRAV8-6A0A0B4J262 113 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 H0YJW9 148 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 K7EN84 100 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 HSPB6O14558 160 aa11.73□□□□□ -0.53
GTF3C1-203ENST00000562609 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms