RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 RPL31P62899 125 aaKnown RBP11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 SAMD10Q9BYL1 202 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 GNG12Q9UBI6 72 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 FCN1O00602 326 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 SP1P08047 785 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 ERVK-16P61578 105 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 TGFBR3Q03167 851 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 HLA-DRB5Q30154 266 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 TDRG1Q3Y452 100 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 OR1L6Q8NGR2 347 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 PAM16Q9Y3D7 125 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 A8MXE2 369 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 KLRC4-KLRK1H3BQV0 150 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 M0R1X1 148 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 IGHV3-13P01766 116 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 IGHV3-7P01780 117 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 DUTP33316 252 aaKnown RBP11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 IER3P46695 156 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 SELENOTP62341 195 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 C11orf53Q8IXP5 236 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 VN1R17PQ8TDU5 208 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 ZPBPQ9BS86 351 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 TP53TG3Q9ULZ0 132 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 FZR1Q9UM11 496 aa11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 KLF13Q9Y2Y9 288 aaPredicted RBP11.6□□□□□ -0.55
VPS9D1-202ENST00000561976 M0QZK8 103 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 RPLP1P05386 114 aaKnown RBP11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 GCHFRP30047 84 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 ARG2P78540 354 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 OR5AU1Q8NGC0 362 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 CXXC4Q9H2H0 198 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 TIMM8AO60220 97 aaPredicted RBP11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 TRIP6Q15654 476 aaKnown RBP11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 BATFQ16520 125 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 LPAL2Q16609 132 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 WDR82Q6UXN9 313 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 FOXJ2Q9P0K8 574 aa11.59□□□□□ -0.55
VPS9D1-202ENST00000561976 A6NNC1 897 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 C9orf172C9J069 976 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 K7EN84 100 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 ADH4P08319 380 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 IGHV1-2P23083 117 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 CDKN1AP38936 164 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 TMEM183BQ1AE95 376 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 SMIM21Q3B7S5 101 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 SPATA31B1PQ5VZV4 182 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 GCNT2Q8N0V5 402 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 UHRF2Q96PU4 802 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 VAMP8Q9BV40 100 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 CHODLQ9H9P2 273 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 MSL2Q9HCI7 577 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 SEPSECSQ9HD40 501 aaKnown RBP11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 DMDP11532 3685 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 TRAV3A0A0B4J244 114 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 SNURFLB1AK76 121 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 GFRA3O60609 400 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 TNFSF13O75888 250 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 MT-CO2P00403 227 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 IL6RP08887 468 aaPredicted RBP11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 ZNF718Q3SXZ3 478 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 KRTCAP3Q53RY4 240 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 TPTE2P1Q5T6R2 138 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 PRR7Q8TB68 274 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 MIEN1Q9BRT3 115 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 NPVFQ9HCQ7 196 aa11.58□□□□□ -0.56
VPS9D1-202ENST00000561976 TRGV5A0A0B4J1U4 118 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 PROP1O75360 226 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 AGFG2O95081 481 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 TNFSF15O95150 251 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 IRF2P14316 349 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 VDAC2P45880 294 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 FABP6P51161 128 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 LINC00310P59036 64 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 BPIFB3P59826 476 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 RHOBP62745 196 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 HTD2P86397 168 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 RPEL1Q2QD12 228 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 RPL39P5Q59GN2 51 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 GMPPAQ96IJ6 420 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 FAM103A1Q9BTL3 118 aaKnown RBP11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 ZNF891A8MT65 544 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 F2Z2F3 143 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 YPEL1O60688 119 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 FOXH1O75593 365 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 ACP1P24666 158 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 EFNB3Q15768 340 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 TEX43Q6ZNM6 134 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 OR4P4Q8NGL7 312 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 Q8TCH9 128 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 YPEL2Q96QA6 119 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 C20orf144Q9BQM9 153 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 SPRR3Q9UBC9 169 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 MED13Q9UHV7 2174 aa11.57□□□□□ -0.56
VPS9D1-202ENST00000561976 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 C15orf65H3BRN8 121 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 SPINK4O60575 86 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 FRMD6-AS1P0C7T7 363 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 COL8A2P25067 703 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms