RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 FAM223BA6NKX1 122 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 SULT1C2O00338 296 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 MYOD1P15172 320 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 NCS1P62166 190 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 MSMO1Q15800 293 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 RPEL1Q2QD12 228 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 ZNF818PQ6ZRF7 136 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 FAM223AQ8IWN6 122 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 SPAG16Q8N0X2 631 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 EHFQ9NZC4 300 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 NBEAL2Q6ZNJ1 2754 aa13.14□□□□□ -0.31
CDC42BPB-208ENST00000561271 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 E7EUB6 86 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 BMPR1BO00238 502 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 OR2J3O76001 311 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 HRASP01112 189 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 IL6RP08887 468 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 HERV-K104P61576 105 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 CATR1Q13166 79 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 OR4A47Q6IF82 309 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 TTC9CQ8N5M4 171 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 OR51H1Q8NH63 302 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 SLC25A46Q96AG3 418 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 FUNDC2Q9BWH2 189 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 ANAPC10Q9UM13 185 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 ZNF257Q9Y2Q1 563 aa13.13□□□□□ -0.31
CDC42BPB-208ENST00000561271 EIF4EP06730 217 aaKnown RBP13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 FRMD6-AS1P0C7T7 363 aa13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 AREGP15514 252 aa13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 VBP1P61758 197 aa13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 ATP5G2Q06055 141 aa13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 C15orf32Q32M92 178 aa13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 IL34Q6ZMJ4 242 aa13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 ZBTB34Q8NCN2 500 aa13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 GIMAP1Q8WWP7 306 aa13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 KMT2CQ8NEZ4 4911 aaKnown RBP13.12□□□□□ -0.31
CDC42BPB-208ENST00000561271 DPPA5A6NC42 116 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 RBFOX2O43251 390 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 PMP2P02689 132 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 MAS1LP35410 378 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 RFX2P48378 723 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 RPL8P62917 257 aaKnown RBP13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 AADACL3Q5VUY0 350 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 SLC25A42Q86VD7 318 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 NECAP1Q8NC96 275 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 FXYD6Q9H0Q3 95 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 HRASLSQ9HDD0 168 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 BET1LQ9NYM9 111 aa13.11□□□□□ -0.31
CDC42BPB-208ENST00000561271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 NPIPB5A8MRT5 1133 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 PPP5D1E7EU14 171 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 S1PR2O95136 353 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 RLN1P04808 185 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 REG1AP05451 166 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 CSN3P07498 182 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 HLA-GP17693 338 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 OR5H2Q8NGV7 314 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 MOB3AQ96BX8 217 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 KCTD12Q96CX2 325 aaKnown RBP13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 ZNF2Q9BSG1 426 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 SLC2A9Q9NRM0 540 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 COMMD3Q9UBI1 195 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 S4R3C0 116 aa13.1□□□□□ -0.31
CDC42BPB-208ENST00000561271 TRAV3A0A0B4J244 114 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 CGB1A6NKQ9 187 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 IGHV3-23P01764 117 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 SMIM18P0DKX4 95 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 RPA2P15927 270 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 PRSS3P35030 304 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 TAS2R31P59538 309 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 TAS2R46P59540 309 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 OR4A5Q8NH83 315 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 TMEM140Q9NV12 185 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 FBXL7Q9UJT9 491 aa13.09□□□□□ -0.31
CDC42BPB-208ENST00000561271 HPRT1P00492 218 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 HLA-AP01891 365 aaKnown RBP13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 NQO2P16083 231 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 NAT1P18440 290 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 PSMB6P28072 239 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 GNRHRP30968 328 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 HRH1P35367 487 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 POU2AF1Q16633 256 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 TATDN3Q17R31 274 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 Q8N1Y9 231 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 DMBX1Q8NFW5 382 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 CCDC140Q96MF4 163 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 FANCD2OSQ96PS1 177 aa13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 NAA50Q9GZZ1 169 aaKnown RBP13.08□□□□□ -0.32
CDC42BPB-208ENST00000561271 IZUMO1RA6ND01 250 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 UPK2O00526 184 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 HPGDSO60760 199 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 NDUFB8O95169 186 aa13.07□□□□□ -0.32
CDC42BPB-208ENST00000561271 APOA1P02647 267 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms