RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ALDH3B2P48448 385 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 SYNJ2BPP57105 145 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 CD69Q07108 199 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 EXOSC2Q13868 293 aaKnown RBP9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 OR4A47Q6IF82 309 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 ADAMTSL5Q6ZMM2 481 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 ANKRD13BQ86YJ7 626 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 CROCCP3Q8IVE0 287 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 MMD2Q8IY49 270 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 SPAG16Q8N0X2 631 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 MOB3AQ96BX8 217 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 S100A16Q96FQ6 103 aaKnown RBP9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 OR2A7Q96R45 310 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 ASCL2Q99929 193 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 ZNF2Q9BSG1 426 aaPredicted RBP9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 MIXL1Q9H2W2 232 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 DNAH9Q9NYC9 4486 aa9.67□□□□□ -0.86
CHRNA3-208ENST00000561128 MPPED1O15442 326 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 TMEM127O75204 238 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 OR2J3O76001 311 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 SLC22A5O76082 557 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 IGHV3-23P01764 117 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 RLN1P04808 185 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 ZNF735P0CB33 412 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 RPL27AP46776 148 aaKnown RBP9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 KLF5Q13887 457 aaPredicted RBP9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 SPCS2Q15005 226 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 MSMO1Q15800 293 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 CCDC140Q96MF4 163 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 FANCD2OSQ96PS1 177 aa9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 FYTTD1Q96QD9 318 aaKnown RBP9.66□□□□□ -0.86
CHRNA3-208ENST00000561128 PPP5D1E7EU14 171 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 M0QYG6 137 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 NDUFB8O95169 186 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 HLA-AP01891 365 aaKnown RBP9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 APOA1P02647 267 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 PRSS3P35030 304 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 HERV-K104P61576 105 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 ZNF585BQ52M93 769 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 AADACL3Q5VUY0 350 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 DHRS11Q6UWP2 260 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 ZNF429Q86V71 674 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 TTC9CQ8N5M4 171 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 OR5H2Q8NGV7 314 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 SELENOKQ9Y6D0 94 aa9.65□□□□□ -0.86
CHRNA3-208ENST00000561128 IGLC7A0M8Q6 106 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 IZUMO1RA6ND01 250 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 RBFOX2O43251 390 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 PGLYRP1O75594 196 aaPredicted RBP9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 IGLV1-51P01701 117 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 CSN3P07498 182 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 GP9P14770 177 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 HLA-GP17693 338 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 CD40LGP29965 261 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 INSL3P51460 131 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 OR2B8PP59922 312 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 POU2AF1Q16633 256 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 OR10W1Q8NGF6 305 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 FCAMRQ8WWV6 532 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 TMEM68Q96MH6 324 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 SPIN2AQ99865 258 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 SPIN2BQ9BPZ2 258 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 RSRP1Q9BUV0 290 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 MRPS26Q9BYN8 205 aaKnown RBP9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 RANGRFQ9HD47 186 aaPredicted RBP9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 TMEM140Q9NV12 185 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 BET1LQ9NYM9 111 aa9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
CHRNA3-208ENST00000561128 A0A0G2JLM5 398 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 MFSD2BA6NFX1 497 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 DBX1A6NMT0 343 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 NPIPB5A8MRT5 1133 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 UPK2O00526 184 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 ACTL6BO94805 426 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 IGKV1-39P01597 117 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 IGKV1D-39P04432 117 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 CTRB1P17538 263 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 KIR2DS2P43631 304 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 TAS2R46P59540 309 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 RPL8P62917 257 aaKnown RBP9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 C15orf32Q32M92 178 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 VAX1Q5SQQ9 334 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 CTRB2Q6GPI1 263 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 LAX1Q8IWV1 398 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 Q8N1Y9 231 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 ZBTB34Q8NCN2 500 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 OR4D10Q8NGI6 311 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 OR9G4Q8NGQ1 327 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 OR52I2Q8NH67 350 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 ABHD1Q96SE0 405 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 HRASLSQ9HDD0 168 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 SLC2A9Q9NRM0 540 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 KLK11Q9UBX7 282 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 ZNF257Q9Y2Q1 563 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 NSG2Q9Y328 171 aa9.63□□□□□ -0.87
CHRNA3-208ENST00000561128 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.62□□□□□ -0.87
CHRNA3-208ENST00000561128 FAM223BA6NKX1 122 aa9.62□□□□□ -0.87
CHRNA3-208ENST00000561128 CREBL2O60519 120 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms