RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TMEM68Q96MH6 324 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 OR2A7Q96R45 310 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 PLEKHA2Q9HB19 425 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 VSIG4Q9Y279 399 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 A0A1B0GW64 132 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 E7EUB6 86 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 GSTZ1O43708 216 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 BRI3O95415 125 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 HPRT1P00492 218 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 RLN1P04808 185 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 IGLL1P15814 213 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 CD33P20138 364 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 F2RP25116 425 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 TAS2R31P59538 309 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 TAS2R19P59542 299 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 DEFA6Q01524 100 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 FHL3Q13643 280 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 IL18Q14116 193 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 PHLDA2Q53GA4 152 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 LPCAT3Q6P1A2 487 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 SSX9Q7RTT3 188 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 ARRDC1Q8N5I2 433 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 CD300LFQ8TDQ1 290 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 DGCR14Q96DF8 476 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 BET1LQ9NYM9 111 aa11.84□□□□□ -0.51
SNRPA1-213ENST00000560856 TRAV3A0A0B4J244 114 aa11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 RBMXL2O75526 392 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 S1PR2O95136 353 aa11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 OR4A47Q6IF82 309 aa11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 STEAP1BQ6NZ63 245 aa11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 CMTM1Q8IZ96 169 aa11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 POC5Q8NA72 575 aa11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 ADAD2Q8NCV1 583 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 MRGPRFQ96AM1 343 aa11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 MS4A10Q96PG2 267 aa11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 PRKDCP78527 4128 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-213ENST00000560856 FABP12A6NFH5 140 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 CGB1A6NKQ9 187 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 TEX22C9J3V5 150 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 H3BUA1 57 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 CREBL2O60519 120 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 RAB3DO95716 219 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 IFNA6P05013 189 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 APELAP0DMC3 54 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 MYOD1P15172 320 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 NQO2P16083 231 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 MAS1LP35410 378 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 LPAR6P43657 344 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 SLC38A6Q8IZM9 456 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 TERB2Q8NHR7 220 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 OR5B12Q96R08 314 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 AIFM2Q9BRQ8 373 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 ALX4Q9H161 411 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 SLA2Q9H6Q3 261 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 FAM212BQ9NTI7 297 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 COMMD9Q9P000 198 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 V9GYH0 126 aa11.82□□□□□ -0.52
SNRPA1-213ENST00000560856 ANKRD20A5PA0PJZ0 165 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 UPK2O00526 184 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 TRGV3P03979 118 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 OR9G9P0C7N8 305 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 TPPP2P59282 170 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 RND3P61587 244 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 RPL8P62917 257 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 FOXB2Q5VYV0 432 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 FAAP20Q6NZ36 180 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 TBC1D26Q86UD7 250 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 CCDC190Q86UF4 302 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 CADM3Q8N126 398 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 OR11H1Q8NG94 326 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 OR4A5Q8NH83 315 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 RCC1LQ96I51 464 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 SPIN2AQ99865 258 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 SPIN2BQ9BPZ2 258 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 SLC2A9Q9NRM0 540 aa11.81□□□□□ -0.52
SNRPA1-213ENST00000560856 DPPA5A6NC42 116 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 HMX3A6NHT5 357 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 WIPF1O43516 503 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 ACTL6BO94805 426 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 IGKV1-39P01597 117 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 IGKV1D-39P04432 117 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 LGALS1P09382 135 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 HLA-GP17693 338 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 PI3P19957 117 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 PTBP1P26599 531 aaKnown RBP eCLIP11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 RPL27AP46776 148 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 ZNF79Q15937 498 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 TTC9CQ8N5M4 171 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 OR4C16Q8NGL9 310 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 ZNF486Q96H40 463 aaPredicted RBP11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 PHB2Q99623 299 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 TMEM140Q9NV12 185 aa11.8□□□□□ -0.52
SNRPA1-213ENST00000560856 TRBV9A0A0B4J1U6 114 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 MPPED1O15442 326 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 IGHV3-11P01762 117 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 FGF2P09038 288 aa11.79□□□□□ -0.52
SNRPA1-213ENST00000560856 AKAIN1P0CW23 69 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms