RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RPA2P15927 270 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 ECI1P42126 302 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 TMEM267Q0VDI3 215 aaPredicted RBP15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 SURF2Q15527 256 aaPredicted RBP15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 ECSCRQ19T08 205 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 ZNF57Q68EA5 555 aaPredicted RBP15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 LCNL1Q6ZST4 164 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 MMD2Q8IY49 270 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 LFNGQ8NES3 379 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 VSTM2AQ8TAG5 236 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 R3HDM4Q96D70 268 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 AIFM2Q9BRQ8 373 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 BET1LQ9NYM9 111 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 COMMD9Q9P000 198 aa15.88■□□□□ 0.13
TSPAN3-207ENST00000559494 M0QZ24 198 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 OPN1MWP04001 364 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 ELANEP08246 267 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 OPN1MW2P0DN77 364 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 OPN1MW3P0DN78 364 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 FAUP35544 74 aaKnown RBP15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 FOXE3Q13461 319 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 TNXAQ16473 311 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 AKIRIN2Q53H80 203 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 OR4A47Q6IF82 309 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 UNQ5815/PRO19632Q6UWF5 114 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 RNF152Q8N8N0 203 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 DEDD2Q8WXF8 326 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 C5orf66Q9H5L9 145 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 COPZ2Q9P299 210 aa15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 TSSC4Q9Y5U2 329 aaPredicted RBP15.87■□□□□ 0.13
TSPAN3-207ENST00000559494 TRAV3A0A0B4J244 114 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 A0A1W2PRX2 142 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 SOX15O60248 233 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 TSPAN15O95858 294 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 IGKV1-39P01597 117 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 IGLV1-40P01703 118 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 IGKV1D-39P04432 117 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 PSMB8P28062 276 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 PRR31Q5SQ13 230 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 S100ZQ8WXG8 99 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 TP53RKQ96S44 253 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 KLK15Q9H2R5 256 aa15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 C14orf166Q9Y224 244 aaKnown RBP15.86■□□□□ 0.13
TSPAN3-207ENST00000559494 MGAM2Q2M2H8 2515 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 A0A1W2PN81 502 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 MSGN1A6NI15 193 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 UPK2O00526 184 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 KRASP01116 189 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 RPLP1P05386 114 aaKnown RBP15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 CHRNA7P36544 502 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 C2orf68Q2NKX9 166 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 CXorf66Q5JRM2 361 aaPredicted RBP15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 C10orf55Q5SWW7 151 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 ASPHD1Q5U4P2 390 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 TRIQKQ629K1 86 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 CCDC71LQ8N9Z2 235 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 DMBX1Q8NFW5 382 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 OR4A5Q8NH83 315 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 SRSF12Q8WXF0 261 aaKnown RBP15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 ZFP57Q9NU63 452 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 TMEM140Q9NV12 185 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 FOXA2Q9Y261 457 aaPredicted RBP15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 VSIG4Q9Y279 399 aa15.85■□□□□ 0.13
TSPAN3-207ENST00000559494 C3orf85A0A1B0GTC6 90 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 MARCH11A6NNE9 402 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 E7EUB6 86 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 CREBL2O60519 120 aaPredicted RBP15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 ACTL6BO94805 426 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 IL7P13232 177 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 MYOD1P15172 320 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 G6PCP35575 357 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 RPL23AP62750 156 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 KIAA0141Q14154 515 aaPredicted RBP15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 SP6Q3SY56 376 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 KHDC1LQ5JSQ8 128 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 C18orf65Q6ZTR6 163 aa15.84■□□□□ 0.13
TSPAN3-207ENST00000559494 LINC00854A0A1B0GVQ3 168 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 H0Y980 276 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 MAS1LP35410 378 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 INPP1P49441 399 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 ERVK-16P61578 105 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 RPL8P62917 257 aaKnown RBP15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 CADM3Q8N126 398 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 ADAD2Q8NCV1 583 aaKnown RBP15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 OR5T1Q8NG75 326 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 CASTOR1Q8WTX7 329 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 SEC22AQ96IW7 307 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 SCGB3A2Q96PL1 93 aa15.83■□□□□ 0.12
TSPAN3-207ENST00000559494 A0A1B0GW64 132 aa15.82■□□□□ 0.12
TSPAN3-207ENST00000559494 SERPINE2P07093 398 aa15.82■□□□□ 0.12
TSPAN3-207ENST00000559494 APELAP0DMC3 54 aa15.82■□□□□ 0.12
TSPAN3-207ENST00000559494 PF4V1P10720 104 aa15.82■□□□□ 0.12
TSPAN3-207ENST00000559494 RAB9AP51151 201 aa15.82■□□□□ 0.12
TSPAN3-207ENST00000559494 MYOZ3Q8TDC0 251 aa15.82■□□□□ 0.12
TSPAN3-207ENST00000559494 TMEM230Q96A57 120 aa15.82■□□□□ 0.12
TSPAN3-207ENST00000559494 TMEM68Q96MH6 324 aa15.82■□□□□ 0.12
TSPAN3-207ENST00000559494 TEX13DA0A0J9YY54 714 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-207ENST00000559494 CRYM-AS1A6NIL9 109 aa15.81■□□□□ 0.12
TSPAN3-207ENST00000559494 OR9G9P0C7N8 305 aa15.81■□□□□ 0.12
TSPAN3-207ENST00000559494 HLA-GP17693 338 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms