RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 BMI1P35226 326 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 RANBP1P43487 201 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 RPS25P62851 125 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 OR2B11Q5JQS5 317 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 HES5Q5TA89 166 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 OR10R2Q8NGX6 335 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 EEF1AKMT3Q96AZ1 226 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 FYTTD1Q96QD9 318 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 CENPOQ9BU64 300 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 SLC2A9Q9NRM0 540 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 PRELID3BQ9Y3B1 194 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 V9GY05 133 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 TRAV25A0A0B4J276 109 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 GADD45AP24522 165 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 CALRP27797 417 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 APOC4P55056 127 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 TRAM1Q15629 374 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 DEFB135Q30KP9 77 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 RBPMS2Q6ZRY4 209 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 Q6ZS49 121 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 Q6ZWC4 215 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 OR1L6Q8NGR2 347 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 MRPS7Q9Y2R9 242 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-205ENST00000559245 A0A1B0GW64 132 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 RAB27BO00194 218 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 DEDDO75618 318 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 KBTBD11O94819 623 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 DHFRP00374 187 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 CRYGCP07315 174 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 ZNF735P0CB33 412 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 HSMCR30P0CW71 290 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 AREGP15514 252 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 HIST1H1DP16402 221 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 PSMB6P28072 239 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 TALDO1P37837 337 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 ARFRP1Q13795 201 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 IRF3Q14653 427 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 UNQ9165/PRO28630Q6UXU0 137 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 TMEM167AQ8TBQ9 72 aa12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 YTHDF1Q9BYJ9 559 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-205ENST00000559245 UBE2CO00762 179 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 C8orf88P0DMB2 117 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 HIST1H1BP16401 226 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 CD36P16671 472 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 CTRB1P17538 263 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 ATF4P18848 351 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 PSMA1P25786 263 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 MAS1LP35410 378 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 PSMD7P51665 324 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 KLK9Q2XQG4 91 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 ZNF585BQ52M93 769 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 CTRB2Q6GPI1 263 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 PUSL1Q8N0Z8 303 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 OR2C3Q8N628 320 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 MARC2Q969Z3 335 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 MRPL27Q9P0M9 148 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 KLK9Q9UKQ9 250 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 RBMX2Q9Y388 322 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
CDC42BPB-205ENST00000559245 TRBV7-1A0A0A6YYK4 115 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 MFSD2BA6NFX1 497 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 HLA-DQB1P01920 261 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 CLEC3BP05452 202 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 FABP5Q01469 135 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 SLC38A6Q8IZM9 456 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 OR4S2Q8NH73 311 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 CNBD2Q96M20 576 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 SCN3BQ9NY72 215 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 UBQLN2Q9UHD9 624 aa12.06□□□□□ -0.48
CDC42BPB-205ENST00000559245 IGLV11-55A0A075B6I3 123 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 SLC22A5O76082 557 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 IGLV2-14P01704 120 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 REG1AP05451 166 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 DEFA4P12838 97 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 RAB6AP20340 208 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 GALP22466 123 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 NFYAP23511 347 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 CRHBPP24387 322 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 LGALS9CQ6DKI2 356 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 TCTEX1D2Q8WW35 142 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 RNF183Q96D59 192 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 CXorf58Q96LI9 332 aa12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 HSD17B10Q99714 261 aaKnown RBP12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 ELF5Q9UKW6 265 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPB-205ENST00000559245 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
CDC42BPB-205ENST00000559245 IGHV3-35A0A0C4DH35 117 aa12.04□□□□□ -0.48
CDC42BPB-205ENST00000559245 METTL21EPA6NDL7 271 aa12.04□□□□□ -0.48
CDC42BPB-205ENST00000559245 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
CDC42BPB-205ENST00000559245 MYOD1P15172 320 aa12.04□□□□□ -0.48
CDC42BPB-205ENST00000559245 DTYMKP23919 212 aa12.04□□□□□ -0.48
CDC42BPB-205ENST00000559245 GPR183P32249 361 aa12.04□□□□□ -0.48
CDC42BPB-205ENST00000559245 ELLP55199 621 aaPredicted RBP12.04□□□□□ -0.48
CDC42BPB-205ENST00000559245 OR10A3P58181 314 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms