RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 TRAV24A0A0B4J272 114 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 EDDM3BP56851 147 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 SPATA46Q5T0L3 261 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 EBLN2Q6P2I7 272 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 C20orf204Q6ZNR8 217 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 H2BFWTQ7Z2G1 175 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 ATP5L2Q7Z4Y8 100 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 FAM19A2Q8N3H0 131 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 MBNL3Q9NUK0 354 aaKnown RBP13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 OR1A1Q9P1Q5 309 aa13.52□□□□□ -0.25
HMBOX1-212ENST00000558662 GAGE10A6NGK3 116 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 OR4C46A6NHA9 309 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 FNDC10F2Z333 226 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 RAB31Q13636 194 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 TNXAQ16473 311 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 ZNF542PQ5EBM4 170 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 CENPWQ5EE01 88 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 C1orf185Q5T7R7 199 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 LCN12Q6JVE5 192 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 UFSP1Q6NVU6 142 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 ZNF497Q6ZNH5 498 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 C16orf47Q6ZP98 133 aaPredicted RBP13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 FAM231DQ6ZW35 169 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 ATOH7Q8N100 152 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 OR52E5Q8NH55 327 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 FAM216AQ8WUB2 273 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 GGTLC1Q9BX51 225 aa13.51□□□□□ -0.25
HMBOX1-212ENST00000558662 ZIC3O60481 467 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 DKK1O94907 266 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 IGHV4-34P06331 123 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 EN2P19622 333 aaPredicted RBP13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 EIF4EBP1Q13541 118 aaPredicted RBP13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 Q8IYB0 196 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 OR5A1Q8NGJ0 315 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 IL1F10Q8WWZ1 152 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 FOXB1Q99853 325 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 SMPXQ9UHP9 88 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 SP9P0CG40 484 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 GPM6AP51674 278 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 DSCR4P56555 118 aaPredicted RBP13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 KIAA1644Q3SXP7 199 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 TREML4Q6UXN2 200 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 PLXDC1Q8IUK5 500 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 OR2Y1Q8NGV0 311 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 DPF1Q92782 380 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 SH2D2AQ9NP31 389 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 SCRT2Q9NQ03 307 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 TNFRSF19Q9NS68 423 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 MPC1Q9Y5U8 109 aa13.5□□□□□ -0.25
HMBOX1-212ENST00000558662 ARHGAP21Q5T5U3 1957 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 MUC21A0A0G2JKD1 596 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 MUC21A0A140T8X8 626 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 NEURL1O76050 574 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 IGLV3-19P01714 112 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 G6PCP35575 357 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 RELBQ01201 579 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 RSPO4Q2I0M5 234 aaPredicted RBP13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 MUC21Q5SSG8 566 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 IBA57Q5T440 356 aaKnown RBP13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 PRSS57Q6UWY2 283 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 SPACA3Q8IXA5 215 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 C19orf24Q9BVV8 132 aa13.49□□□□□ -0.25
HMBOX1-212ENST00000558662 SEC16AO15027 2179 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 A0A1B0GV72 72 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 RAC3P60763 192 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 MRPL21Q7Z2W9 205 aaKnown RBP13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 NEGR1Q7Z3B1 354 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 THAP3Q8WTV1 239 aaPredicted RBP13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 GRAMD2BQ96HH9 432 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 AP1S3Q96PC3 154 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 NPVFQ9HCQ7 196 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 A6NDN8 102 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 H3BRM9 83 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 HSPB6O14558 160 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 PPOXP50336 477 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 GNG3P63215 75 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 NHLH1Q02575 133 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 GCSAMLQ5JQS6 135 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 C9orf135Q5VTT2 229 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 SAMD13Q5VXD3 122 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 NEUROG1Q92886 237 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 TRIB1Q96RU8 372 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 MGST2Q99735 147 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 IL36RNQ9UBH0 155 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 TRAPPC2LQ9UL33 140 aa13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 LSM4Q9Y4Z0 139 aaKnown RBP13.48□□□□□ -0.25
HMBOX1-212ENST00000558662 A0A1W2PR80 420 aa13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 SYS1-DBNDD2H3BUS1 97 aa13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 RRHO14718 337 aa13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 HAND1O96004 215 aa13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 FRMD6-AS1P0C7T7 363 aa13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 EFNB3Q15768 340 aa13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 Q6P435 159 aa13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 TMEM186Q96B77 213 aa13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 ZNF837Q96EG3 531 aaPredicted RBP13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 HSD17B10Q99714 261 aaKnown RBP13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 SOX21Q9Y651 276 aaPredicted RBP13.47□□□□□ -0.25
HMBOX1-212ENST00000558662 IGHV3-20A0A0C4DH32 117 aa13.46□□□□□ -0.25
HMBOX1-212ENST00000558662 HBZP02008 142 aa13.46□□□□□ -0.25
HMBOX1-212ENST00000558662 GPR183P32249 361 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms